SRR6575648_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575648_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	300499
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	587	0.19534174822545164	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	404	0.13444304307169078	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	399	0.13277914402377378	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	381	0.1267891074512727	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	307	0.10216340154210164	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	860	0.0	40.43742	1
GTACATG	1830	0.0	39.54757	1
TACATGG	1830	0.0	38.77716	2
CCCTATA	50	0.0017009439	37.595875	1
TACGACG	50	0.0017023354	37.589615	5
ACATGGG	1850	0.0	37.589615	3
CGACGGT	55	0.0027175075	34.17238	7
ACGACGG	55	0.0027175075	34.17238	6
CATGGGA	910	0.0	33.045815	4
AACGCAG	1065	0.0	32.64826	6
CAACGCA	1100	0.0	31.60945	5
TCAACGC	1110	0.0	31.32468	4
ATCAACG	1120	0.0	31.044996	3
CATGGGT	425	0.0	29.850576	4
GGGTACC	205	1.8189894E-12	29.796648	7
CATGGGG	685	0.0	28.80956	4
CGCAGAG	1270	0.0	27.74824	8
ATGGGTA	255	0.0	27.639421	5
TATCAAC	1310	0.0	27.622923	2
ACGCAGA	1260	0.0	27.59555	7