SRR6575559_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575559_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	148333
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	267	0.180000404495291	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	253	0.17056218103860907	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	209	0.14089919303189447	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	179	0.12067442848186175	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	162	0.10921372857017655	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	162	0.10921372857017655	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	154	0.10382045802350118	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCCTTAA	40	5.5813574E-4	47.134594	1
TAGCCCT	90	2.4920155E-10	46.991573	4
ATAGCCC	45	0.0010119907	41.770287	3
GTATCAA	600	0.0	40.849983	1
GGGTACC	60	8.7962355E-5	39.15964	7
TCTTCCG	50	0.0016931251	37.61862	94
ATGGGAC	125	1.4915713E-10	37.593254	5
AACGCAG	725	0.0	33.7043	6
ATCAACG	765	0.0	32.55625	3
ACATGGG	1180	0.0	32.256927	3
GTACATG	1210	0.0	31.942453	1
CAACGCA	780	0.0	31.93017	5
TCAACGC	770	0.0	31.734568	4
TACATGG	1195	0.0	31.458792	2
ATGGGTA	105	2.0522475E-6	31.327715	5
ATGGGAG	240	0.0	31.327713	5
TAATACC	60	0.0041530565	31.327713	4
TACCCTG	60	0.0041530565	31.327713	5
TATGGGC	60	0.0041530565	31.327713	3
ACGCAGA	820	0.0	29.799532	7