SRR6575511_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575511_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1059642
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2555	0.24111917043680792	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1476	0.13929232703120487	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1412	0.13325255133337485	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	1212	0.11437825227765604	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	1174	0.11079213545706947	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	1109	0.10465798826396085	No Hit
ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG	1090	0.10286492985366756	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1600	54.787727	1
GGTATCA	505	46.6626	1
TCAACGC	2005	42.198708	4
CAACGCA	2090	40.482494	5
ATCAACG	2105	40.419228	3
CTTAGGT	580	38.09179	3
AACGCAG	2270	37.686565	6
GTCTTAG	780	36.253254	1
TTAGGTA	640	35.987953	4
AGGTATA	590	35.851025	6
GTACATG	4005	35.18512	1
TACATGG	4000	34.66758	2
TAGGTAT	640	34.519054	5
TATCAAC	2580	33.524296	2
ACATGGG	4220	32.860268	3
GTATAGT	690	32.694275	8
GGTATAG	655	32.288715	7
TATAGTA	735	30.692581	9
CATGGGG	2640	30.446209	4
ACGCAGA	2855	29.960207	7