SRR6575470_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575470_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	208014
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	538	0.25863643793206226	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	398	0.1913332756449085	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	333	0.16008537886872998	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	324	0.15575874700741296	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	304	0.14614400953781956	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	272	0.13076042958647013	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	265	0.12739527147211246	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	259	0.12451085023123443	No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCG	243	0.11681906025555971	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	240	0.11537684963512072	No Hit
GTATCAACGCAGAGTACATGGGTACCTGGTTGATCCTGCCAGTAGCATAT	214	0.10287769092464931	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	715	0.0	42.781437	1
GGTACCT	255	0.0	36.873966	8
CATGGGT	370	0.0	35.56129	4
AACGCAG	845	0.0	34.479122	6
GGGTACC	260	0.0	34.34009	7
ATAGAGT	55	0.002714266	34.17579	6
ATGGGTA	275	0.0	34.175785	5
ATCAACG	870	0.0	33.488342	3
TCAACGC	875	0.0	33.29698	4
CAACGCA	905	0.0	32.193214	5
TAATAGA	75	3.2697784E-4	31.327805	4
GTACATG	1170	0.0	30.970837	1
ACATGGG	1185	0.0	30.534695	3
TACATGG	1185	0.0	30.13814	2
ACGCAGA	970	0.0	29.551487	7
CGCAGAG	1005	0.0	29.003855	8
GTATCGT	65	0.006148042	28.917974	5
TATCGTG	65	0.006148042	28.917974	6
TGGGTAC	320	0.0	27.901327	6
ATCCTAG	85	6.7470165E-4	27.682106	1