SRR6575426_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575426_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	89856
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	244	0.27154558404558404	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	189	0.21033653846153846	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	127	0.14133725071225073	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	113	0.1257567663817664	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	102	0.11351495726495728	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	97	0.10795049857549857	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	94	0.10461182336182337	No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG	93	0.10349893162393163	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	92	0.10238603988603988	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	90	0.1001602564102564	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTAGTAC	15	6.8844244E-4	93.989426	3
TATGCAC	25	0.005222714	56.393658	5
TAATTCA	25	0.005222714	56.393658	4
TGGGTAC	80	4.5620254E-9	46.994717	6
CTGGGTA	40	5.651798E-4	46.994717	4
GGTACCT	85	7.798008E-9	44.230316	8
GGGTACC	85	7.798008E-9	44.230316	7
GTACTTG	65	2.7059068E-6	43.500774	1
GTACTGT	55	5.2476396E-5	42.72247	6
TAGTACT	45	0.001009526	41.77308	4
GTACCTG	100	3.271998E-8	37.59577	9
ATGGGTA	90	6.111459E-7	36.551445	5
CATGGGG	320	0.0	33.77745	4
GTATCAA	510	0.0	31.417225	1
GTACATG	690	0.0	30.734241	1
AACGCAG	580	0.0	29.979385	6
TACATGG	690	0.0	29.967644	2
ACATGGG	710	0.0	29.785381	3
CAACGCA	585	0.0	29.723152	5
TCAACGC	590	0.0	29.47126	4