SRR6575426_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575426_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	89856
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	193	0.21478810541310542	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	157	0.17472400284900283	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA	130	0.14467592592592593	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	119	0.13243411680911682	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	102	0.11351495726495728	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	93	0.10349893162393163	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATACG	15	6.852704E-4	94.09861	1
TATATGG	25	5.502831E-5	75.278885	2
TATACGG	25	0.005198754	56.459164	2
CCGGGCT	25	0.005221735	56.396328	9
CGCAAGA	35	2.9078167E-4	53.770634	2
TAGTTCC	40	5.650478E-4	46.99694	94
GTATCAA	310	0.0	45.531586	1
ACGGACC	45	0.0010092907	41.77506	8
TTATTGT	45	0.0010092907	41.77506	4
CGGACCA	45	0.0010092907	41.77506	9
CGTCGTA	25	0.0016987525	37.597553	88-89
CGATCAG	25	0.0016987525	37.597553	78-79
AAGTCGG	25	0.0016987525	37.597553	60-61
AACGCAG	370	0.0	35.565254	6
GCGCAAG	55	0.0026898817	34.217674	1
CAACGCA	385	0.0	34.179592	5
AGACGGA	55	0.0027046246	34.179592	6
GACGGAC	55	0.0027046246	34.179592	7
TCAACGC	385	0.0	34.179592	4
CCGTCGT	35	2.1785365E-4	33.569244	88-89