SRR6575376_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575376_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	757538
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2854	0.37674677705936865	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1748	0.2307475004554227	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1688	0.22282710570294822	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1233	0.16276411216335024	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1105	0.14586727002473804	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1075	0.1419070726485008	No Hit
GTGCAAGGGTAATCATTTATTGAACAGGAAGAGGAAGAAATTCATGAAAA	874	0.11537375022771135	No Hit
CATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAGGATGGAATGCA	858	0.11326164496038482	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	830	0.1095654607425634	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGTGTTTGGGGCT	815	0.1075853620544448	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	425	0.0	55.314083	1
GTATCAA	1615	0.0	51.238308	1
ATCAACG	1780	0.0	45.942207	3
TCAACGC	1780	0.0	45.942207	4
CAACGCA	1885	0.0	43.632416	5
AACGCAG	1970	0.0	42.226944	6
TATCAAC	2160	0.0	38.310123	2
GTCTTAG	650	0.0	36.1669	1
CTTAGGT	540	0.0	35.68393	3
AGGTATA	550	0.0	35.035133	6
GTACATG	2925	0.0	33.59503	1
CATATAG	140	5.11136E-10	33.57025	3
ACGCAGA	2495	0.0	33.341515	7
CGCAGAG	2545	0.0	32.686474	8
TAGGTAT	590	0.0	32.65987	5
GGTATAG	605	0.0	32.626953	7
TACATGG	2975	0.0	32.55629	2
AAGGGTA	390	0.0	32.53732	5
TTAGGTA	595	0.0	32.385418	4
AGGGTAA	365	0.0	32.19065	6