SRR6575375_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575375_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	556827
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	2612	0.46908644875338307	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	1723	0.30943183430401183	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	1563	0.2806975954829777	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1110	0.19934378182092463	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	907	0.16288721631673753	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	904	0.16234844933884313	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	786	0.1411569482083304	No Hit
GTGCAAGGGTAATCATTTATTGAACAGGAAGAGGAAGAAATTCATGAAAA	766	0.13756516835570115	No Hit
ACTTAAGACAGACTATGATAATTATATTATGATTCATCTCATTAACAAAA	747	0.13415297749570335	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGTGTTTGGGGCT	677	0.12158174801150089	No Hit
CATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAGGATGGAATGCA	623	0.11188394240940186	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1595	0.0	54.541992	1
GGTATCA	425	0.0	53.10951	1
ATCAACG	1770	0.0	47.251495	3
CAACGCA	1795	0.0	46.593395	5
TCAACGC	1855	0.0	45.08633	4
AACGCAG	1905	0.0	44.14961	6
TATCAAC	1950	0.0	43.644035	2
GTACTAG	110	1.7844286E-9	38.474216	1
ACGCAGA	2205	0.0	37.92977	7
CGCAGAG	2295	0.0	36.44233	8
AAGGGTA	235	0.0	35.989304	5
GCAGAGT	2400	0.0	34.847977	9
GTGCAAG	340	0.0	30.427322	1
GTGTAAT	170	1.2187229E-10	30.427322	1
ATAGACG	95	3.7564496E-5	29.67539	8
CTTAGGT	510	0.0	29.481436	3
GTACATG	2315	0.0	28.84412	1
TTAGGTA	540	0.0	28.713688	4
ACCAGAT	1230	0.0	28.268023	94
ACCTAAG	915	0.0	28.265818	1