SRR6575370_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575370_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	270088
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	633	0.2343680578181926	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	506	0.18734634637599598	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	396	0.14661887977251858	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	370	0.1369923876662421	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	362	0.13403039009508014	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	333	0.12329314889961791	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG	310	0.11477740588252718	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	290	0.1073724119546222	No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCG	273	0.10107816711590296	No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGG	271	0.10033766772311248	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTTCGCA	45	0.0010127436	41.77638	9
CATATAG	70	4.5355846E-6	40.396557	1
GTATCAA	825	0.0	39.417244	1
TAGCCCG	50	0.0017000022	37.59874	5
TATGCAC	80	1.1556393E-5	35.248817	5
GGGTACC	270	0.0	34.81365	7
GGTACCT	275	0.0	32.471638	8
CGGTTAT	60	0.004156079	31.332283	94
GGACTAT	60	0.004156079	31.332283	6
CATGGGG	595	0.0	30.805689	4
TCAACGC	1030	0.0	30.57179	4
ATCAACG	1035	0.0	30.424103	3
GTACATG	1430	0.0	30.320957	1
CAACGCA	1045	0.0	30.132965	5
GGTATCA	470	0.0	30.082542	1
TACATGG	1475	0.0	28.68763	2
ACATGGG	1465	0.0	28.551945	3
AACGCAG	1090	0.0	28.457764	6
CATGGGT	425	0.0	27.646135	4
GTACCTG	345	0.0	27.245464	9