SRR6575337_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575337_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	218139
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	504	0.23104534264849477	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	437	0.20033098162180996	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	296	0.1356932964761001	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	270	0.12377429070455077	No Hit
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	270	0.12377429070455077	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	232	0.10635420534613252	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	229	0.10497893544941528	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	225	0.1031452422537923	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATAGTAT	50	4.5494926E-7	56.394497	6
CCTTTAT	40	5.61817E-4	47.08178	1
TAAGTAT	65	2.776369E-6	43.380383	5
ATATAGT	65	2.776369E-6	43.380383	4
GTATCAA	595	0.0	40.355812	1
TAGTATA	75	7.4208874E-6	37.596333	7
GTACATG	1335	0.0	35.9726	1
TACATGG	1320	0.0	35.95861	2
CTTAAGT	80	1.1551272E-5	35.24656	3
GTATAGT	120	4.1782187E-9	35.24656	8
TATTAGC	55	0.0027135035	34.178482	2
TATAGTG	55	0.0027135035	34.178482	5
ACATGGG	1365	0.0	34.084587	3
CATGGGG	770	0.0	32.347496	4
GGTACCT	205	0.0	32.09443	8
TCAACGC	755	0.0	31.745247	4
CCTATAT	60	0.0041184505	31.387854	1
GGGTACC	180	7.2759576E-12	31.330276	7
TCTTAAG	90	2.5860949E-5	31.330276	2
CCGTCGT	75	3.2687804E-4	31.330276	9