SRR6575326_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575326_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	236692
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	518	0.21884981325942576	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	512	0.21631487333750188	No Hit
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	318	0.13435181586196407	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	309	0.1305494059790783	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	267	0.11280482652561136	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	260	0.10984739661670019	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	246	0.10393253679887786	No Hit
GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA	244	0.10308755682490325	No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCCTTCCCGGGGGGGGATGCG	239	0.10097510688996672	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCCGGT	25	0.005138336	56.654976	1
TGGGTAC	225	0.0	50.125896	6
GTATCAA	675	0.0	47.562202	1
GGGTACC	265	0.0	46.106365	7
GGTACCT	260	0.0	45.185604	8
GTACATG	1260	0.0	42.34135	1
TACATGG	1275	0.0	41.64872	2
ACATGGG	1300	0.0	40.4863	3
AACGCAG	855	0.0	38.473824	6
ATCAACG	855	0.0	37.9242	3
TTGCGCT	50	0.0017005367	37.59442	4
CAACGCA	865	0.0	37.485767	5
TCAACGC	890	0.0	36.432796	4
GTATAAA	105	4.884896E-8	35.971413	1
GTATAGT	95	9.4195093E-7	34.626442	8
TATCAAC	950	0.0	34.62644	2
CATGGGG	780	0.0	33.738583	4
GTGCAAG	70	2.1227663E-4	33.723198	1
TTAGGTA	70	2.1816845E-4	33.566444	4
ATTATCC	170	3.6379788E-12	33.17155	3