SRR6575326_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575326_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	236692
Sequences flagged as poor quality	0
Sequence length	100
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	554	0.23405945279096887	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	361	0.15251888530241833	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	319	0.1347743058489514	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	305	0.12885944603112906	No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT	275	0.11618474642150982	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	248	0.10477751677285248	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA	247	0.10435502678586518	No Hit
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	245	0.10351004681189056	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	580	0.0	52.68995	1
CCTAAGG	50	0.0016965186	37.61252	2
TGTTTAC	50	0.0017035814	37.580734	5
AACGCAG	860	0.0	35.50505	6
CAACGCA	865	0.0	35.299816	5
TCAACGC	865	0.0	35.299816	4
ATCAACG	870	0.0	34.556995	3
GTACATG	1305	0.0	33.865677	1
GGTATCA	250	0.0	33.851265	1
TAGCGCG	70	2.1863554E-4	33.554222	4
TACATGG	1305	0.0	33.5054	2
GTACAGG	90	2.5794136E-5	31.343767	1
CTATTAT	180	7.2759576E-12	31.343767	1
CATAAGG	90	2.5794136E-5	31.343767	2
CCCATAT	60	0.004147599	31.343767	1
TAGGAGT	60	0.004164804	31.317278	4
ACATGGG	1375	0.0	31.089516	3
TATCAAC	1020	0.0	30.421892	2
GTCTTAG	155	1.5006663E-9	30.332678	1
CATAGGG	65	0.006134437	28.932707	2