SRR6575293_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575293_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	36359
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	104	0.2860364696498804	No Hit
GTAAAAGAATATGAAATATAGCCTTGTCTAAATTCTCTTGCTGACTCTCT	57	0.15676998817349214	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	51	0.1402678841552298	No Hit
GTACATGGGAGGCAGAGCTGTTGTGGTCAGCTGTGGAAAGGAAGCCTCGT	50	0.1375175334855194	No Hit
CTTGTAGACAATGTCGCCCAATGTCATGGTATTGGTGATTGTGTCTCCAT	46	0.12651613080667787	No Hit
GTACATGGGGAGGCAGAGCTGTTGTGGTCAGCTGTGGAAAGGAAGCCTCG	45	0.12376578013696747	No Hit
CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA	42	0.11551472812783631	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	41	0.11276437745812591	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	41	0.11276437745812591	No Hit
ATTTTACACTGTAAAAGAATATGAAATATAGCCTTGTCTAAATTCTCTTG	40	0.11001402678841553	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGGGAGT	20	0.0021472415	70.490715	7
TCCTATT	20	0.0021472415	70.490715	2
TGTAGCA	20	0.0021472415	70.490715	5
CCTATTC	20	0.0021472415	70.490715	3
CATGGGG	195	0.0	62.658417	4
GTACATG	290	0.0	60.123016	1
TACATGG	295	0.0	58.94139	2
GTCATAA	25	0.0051416876	56.548138	1
TATCATA	25	0.00519817	56.39257	2
TACCCCT	25	0.00519817	56.39257	4
ATTAACT	25	0.00519817	56.39257	3
GATTAAC	25	0.00519817	56.39257	2
ACATGGG	315	0.0	55.199074	3
ATGGGGA	95	0.0	54.413887	5
TGAACAC	35	2.9016356E-4	53.70721	5
ATGGGAG	45	1.5842059E-5	52.215343	5
ATGGGGC	55	8.583156E-7	51.265976	5
CATGGGA	100	1.2732926E-11	46.99381	4
TGGGGAG	65	2.7133538E-6	43.3789	6
TTGAACA	45	0.0010016862	41.772278	4