SRR6575282_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575282_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	38455
Sequences flagged as poor quality	0
Sequence length	100
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	89	0.23143934468859706	No Hit
GTACATGGGAGGCAGAGCTGTTGTGGTCAGCTGTGGAAAGGAAGCCTCGT	68	0.17683006111038876	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	49	0.12742166168248603	No Hit
CTTGTAGACAATGTCGCCCAATGTCATGGTATTGGTGATTGTGTCTCCAT	47	0.12222077753218047	No Hit
GTAAAAGAATATGAAATATAGCCTTGTCTAAATTCTCTTGCTGACTCTCT	46	0.11962033545702769	No Hit
GTACATGGGGAGGCAGAGCTGTTGTGGTCAGCTGTGGAAAGGAAGCCTCG	43	0.11181900923156937	No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA	41	0.10661812508126381	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	40	0.10401768300611104	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATTAA	15	6.851151E-4	94.0	1
GTATCAA	105	0.0	58.190475	1
CTTGGAC	25	0.005197743	56.4	3
GGGGGAC	25	0.005197743	56.4	7
CATGGGT	35	2.90187E-4	53.714287	4
GGTATCA	45	1.5847065E-5	52.222225	1
GTACATG	300	0.0	50.133335	1
ACATGGG	310	0.0	48.516125	3
TACATGG	315	0.0	47.746033	2
AACGCAG	130	0.0	47.0	6
CAACGCA	135	0.0	45.25926	5
ATCAACG	135	0.0	45.25926	3
TCAACGC	135	0.0	45.25926	4
CATGGGA	120	1.8189894E-12	43.083332	4
CATGGGG	175	0.0	40.285717	4
TATCAAC	155	0.0	39.419353	2
TGGGGGA	75	7.2579387E-6	37.600002	6
CGCAGAG	165	0.0	37.0303	8
ATGGGGC	65	1.3882505E-4	36.153847	5
ATGGGGG	80	1.1298402E-5	35.25	5