SRR6575178_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575178_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	856521
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	4358	0.5088024695249738	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	2631	0.30717285390550847	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	2555	0.29829974980181456	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1549	0.18084787179765588	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1422	0.16602044783490422	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGTGTTTGGGGCT	1162	0.13566509169068827	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1112	0.12982752320141597	No Hit
CATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAGGATGGAATGCA	945	0.11033004444724646	No Hit
ATCTATGGTTGCTGACAAAACAGAAAAGGCTGGTGAATATTCTGTGACGT	929	0.10846202253067935	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGCTGTGTTTGGG	888	0.10367521636947606	No Hit
GTGTAGCCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCT	883	0.10309145952054882	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1670	50.49793	1
TCAACGC	1910	43.062668	4
GGTATCA	430	42.730026	1
ATCAACG	1925	42.727116	3
CAACGCA	1990	41.803864	5
AACGCAG	2085	39.899136	6
TATCAAC	2210	37.429726	2
GTACATG	3580	34.873848	1
CTTAGGT	755	34.860794	3
TACATGG	3570	34.756176	2
TAGGTAT	770	34.18169	5
GTCTTAG	870	34.116016	1
TTAGGTA	780	33.1409	4
ACATGGG	3775	33.117756	3
GGTAATC	350	32.22657	8
ACCTAAG	1420	32.182545	1
CTAAGAC	1490	32.174377	3
AGGTATA	795	31.92441	6
ACGCAGA	2635	31.569199	7
GGTATAG	815	31.13917	7