SRR6575177_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR6575177_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	827723
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAGACAGACTATGATAACTTTCTTATGGCTCATCTCATTAACGAAA	5083	0.6140943286582589	No Hit
GTCTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTC	3241	0.391556112370926	No Hit
CTATTATCCTGGCCTCTGACAAAAGAGAAAAGATAGAAGATAATGGCAAC	3036	0.3667893727732587	No Hit
GAATTTATACTGGGGATGCTGTATGGATAGGAAGGGATGATGGTGGAGTC	1858	0.2244712301095898	No Hit
CTATTATCCTGGCCTCTGACAAGAGAGAAAAGATAGAAGATAATGGCAAC	1667	0.20139587760639732	No Hit
ATCCTAGGTAACATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAG	1393	0.1682930159002468	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGTGTTTGGGGCT	1274	0.15391622559721066	No Hit
CATGTGGATAGACTGGAATTGGACTTCTCAGTGAGACAGGATGGAATGCA	1111	0.13422364728296785	No Hit
ATCTATGGTTGCTGACAAAACAGAAAAGGCTGGTGAATATTCTGTGACGT	1016	0.12274637771331715	No Hit
GTGTAGCCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCT	1010	0.12202149752997078	No Hit
GAATTGGACTTCTCAGTGAGACAGGATGGAATGCAGATCACAGAATTTAT	967	0.11682652288265519	No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT	912	0.11018178786864688	No Hit
GTACATGGGGGAGTGTAGCCACGATCACAAGAAAGACGTGGTCCTGACAG	910	0.10994016114086475	No Hit
ATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTGCTGCTGTGTTTGGG	898	0.10849040077417203	No Hit
TCACATAGTTGTGCAAACCTTTCCTTGATGTCTGAACTCAAATCTGGTTC	893	0.10788633395471672	No Hit
GTGCAAGGGTAATCATTTATTGAACAGGAAGAGGAAGAAATTCATGAAAA	870	0.10510762658522234	No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG	857	0.10353705285463857	No Hit
GTATTGAATCCATCATACGTCACAGAATATTCACCAGCCTTTTCTGTTTT	838	0.10124159894070843	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1600	52.934067	1
GGTATCA	285	49.528954	1
TCAACGC	1750	46.455753	4
ATCAACG	1785	45.808117	3
CAACGCA	1820	44.410786	5
GGTAATC	345	43.616516	8
AACGCAG	1900	43.03552	6
AGGGTAA	410	38.96965	6
TATCAAC	2115	38.440884	2
GTACATG	3370	37.41861	1
AAGGGTA	440	37.380646	5
TACATGG	3405	36.85121	2
TAGGTAT	1000	36.184467	5
ACATGGG	3475	35.971474	3
TTAGGTA	1035	35.41487	4
ACGCAGA	2350	34.794678	7
GGTATAG	1050	34.461395	7
CTTAGGT	1065	33.976025	3
CGCAGAG	2460	33.452072	8
GTCTTAG	1155	33.405243	1