FastQCFastQC Report
Tue 23 Apr 2019
G168_G169_M8_R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG168_G169_M8_R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30280643
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT370210.12225962308660356No Hit
CTTAGGTATAGTAAATGTATTGAATCCATCATACGTCACAGAATATTCAC356670.11778811962480454No Hit
CTGGAATTGGACTTCTCAGTGAGACAGGATGGAATGCAGATCACAGAATT352090.11627560220567311No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.8)