FastQCFastQC Report
Wed 24 Apr 2019
SRR6833754_R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR6833754_R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15728253
Sequences flagged as poor quality0
Sequence length32-36
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTT8264365.254467867473902TruSeq Adapter, Index 1 (97% over 35bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG320090.20351274868225985No Hit
TATCGGAAGAGCACACGTCTGAACTCCAGTCACTT157310.10001746538538005TruSeq Adapter, Index 3 (97% over 35bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.8)