G155-M9-Index1_ATCACG-_ACB6A7ANXX_L008_001.R1.fastq FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	G155-M9-Index1_ATCACG-_ACB6A7ANXX_L008_001.R1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	23857341
Sequences flagged as poor quality	0
Sequence length	50
%GC	44

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	870	0.0	13.908629	1
TCGTATG	965	0.0	11.854103	43
CTCGTAT	965	0.0	11.170541	42
ATCGGAA	1125	0.0	10.560466	2
CGTATGC	1035	0.0	10.414696	44
TCTCGTA	1060	0.0	9.54695	41
ACGATCT	1245	0.0	8.481964	37
CACGATC	1200	0.0	8.433405	36
ACACGTC	1600	0.0	7.9747167	13
TCACGAT	1420	0.0	7.436823	35
CGTCTGA	1660	0.0	7.421547	16
ATCACGA	1570	0.0	7.146677	34
GATCTCG	1505	0.0	7.016509	39
CGATCTC	1415	0.0	6.996335	38
ATCTCGT	1620	0.0	6.92581	40
CATCACG	1795	0.0	6.618649	33
ACGTCTG	2045	0.0	6.4545927	15
TCGGAAG	1910	0.0	6.4505467	3
CGGAAGA	2275	0.0	5.222	4