FastQCFastQC Report
Tue 27 Jun 2017
G155-M8-Index27_ATTCCT-_ACB6A7ANXX_L008_001.R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG155-M8-Index27_ATTCCT-_ACB6A7ANXX_L008_001.R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20973726
Sequences flagged as poor quality0
Sequence length50
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA7050.010.2979691
CTCGTAT6700.09.84992244
TCTCGTA7300.08.739078543
ATCGGAA8650.08.13882352
CGTCTGA10850.06.893991516
ACACGTC12100.06.181581513
TATCTCG11251.3278623E-105.86658141
ACGTCTG14450.05.785315
ATCTCGT13154.1836756E-115.520674742
TCGGAAG15505.456968E-125.25167473
Produced by FastQC (version 0.11.2)