G144-M7-Index-19_GTGAAA_BC9WPLANXX_L008_001.R1.fastq FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	G144-M7-Index-19_GTGAAA_BC9WPLANXX_L008_001.R1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	40666652
Sequences flagged as poor quality	0
Sequence length	50
%GC	44

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTCGTAT	1990	0.0	10.271254	44
TCTCGTA	2170	0.0	8.811664	43
AACGATC	2245	0.0	8.321927	38
ACGATCT	2605	0.0	7.171863	39
TTACGCG	820	1.07320375E-10	6.9865546	16
ATCGACG	590	1.4910638E-6	6.705549	41
TACGCGA	800	3.248715E-9	6.610111	17
GATCTCG	2915	0.0	6.5598593	41
TGAAACG	3395	0.0	6.5394206	35
ATCTCGT	2940	0.0	6.503911	42
CGATCTC	2785	0.0	6.4714084	40
ACGACGC	1825	0.0	6.1575923	16
GAAACGA	4090	0.0	5.857867	36
AAACGAT	3710	0.0	5.8060174	37
CACGACG	1955	0.0	5.7482557	15
TACACGA	2285	0.0	5.593359	13
TCCGATC	2350	0.0	5.425886	26
CGACGCT	2190	0.0	5.0305257	17
AGTCACG	4510	0.0	5.020441	28