G129-M4_TGACCA_AC8VLWANXX_L007_001.R2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	G129-M4_TGACCA_AC8VLWANXX_L007_001.R2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15829129
Sequences flagged as poor quality	0
Sequence length	50
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	708899	4.478446034522809	Illumina Single End PCR Primer 1 (100% over 50bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGTCGT	84990	43.42729	11
CGTCGTG	85155	43.368706	12
GATCGGA	83580	43.2826	1
TCGTGTA	84285	43.205765	14
AGCGTCG	84650	43.14762	10
CGTGTAG	84500	43.075005	15
GTCGTGT	86555	43.012882	13
AGAGCGT	85425	42.901337	8
TCTCGGT	84915	42.89952	36
GATCTCG	84155	42.87969	34
GAGCGTC	85075	42.86383	9
GTAGATC	84750	42.861855	31
GTAGGGA	82785	42.85171	18
ATCGGAA	84040	42.766087	2
TGTAGGG	86060	42.74448	17
ATCTCGG	84690	42.73157	35
GTGTAGG	86220	42.667305	16
AAGAGCG	84565	42.648033	7
GTCGCCG	83340	42.61261	44
GGTCGCC	83130	42.580624	43