G128-M5A-B_ACAGTG_AC8WFRANXX_L001_001.R2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	G128-M5A-B_ACAGTG_AC8WFRANXX_L001_001.R2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11650472
Sequences flagged as poor quality	0
Sequence length	50
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	300940	2.5830713124755804	Illumina Single End PCR Primer 1 (100% over 50bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGTCGT	40480	43.188816	11
CGTCGTG	40675	42.906223	12
TCGTGTA	39825	42.844242	14
AGCGTCG	40325	42.76563	10
CGTGTAG	39610	42.760403	15
GATCGGA	39830	42.75693	1
TCTCGGT	40075	42.444668	36
GTCGTGT	41475	42.434006	13
AGAGCGT	40795	42.41313	8
GATCTCG	39655	42.406025	34
GAGCGTC	40535	42.354122	9
ATCGGAA	39910	42.329456	2
GTAGGGA	38560	42.327126	18
GTAGATC	39860	42.3136	31
TGTAGGG	40795	42.089935	17
TGGTCGC	39480	42.072067	42
ATCTCGG	39990	42.017776	35
GTGGTCG	39945	41.99973	41
GTCGCCG	39615	41.983013	44
GTGTAGG	40910	41.9286	16