G128-M4-B_TGACCA_AC8WFRANXX_L001_001.R2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	G128-M4-B_TGACCA_AC8WFRANXX_L001_001.R2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9408758
Sequences flagged as poor quality	0
Sequence length	50
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	336112	3.5723312258642426	Illumina Single End PCR Primer 1 (100% over 50bp)
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	132481	1.4080604475107128	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	28718	0.3052262583435561	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	43530	43.519394	1
TCGTGTA	43710	43.37403	14
GTCGTGT	45205	43.3314	13
AGAGCGT	44775	43.32991	8
ATCGGAA	43445	43.3159	2
CGTCGTG	45050	43.07541	12
GATCTCG	43690	43.0421	34
CGTGTAG	43955	43.00737	15
GCGTCGT	45270	42.99705	11
ATCTCGG	43755	42.953022	35
AAGAGCG	44195	42.938087	7
GTGGTCG	43375	42.87062	41
GGTCGCC	42605	42.86579	43
TCTCGGT	44340	42.80805	36
TCGGAAG	44310	42.72848	3
AGCGTCG	45145	42.61906	10
TCGGTGG	44975	42.600986	38
CTCGGTG	44160	42.583996	37
CGGTGGT	44690	42.570168	39
GAGCGTC	45125	42.569702	9