G128-M11-B_GGCTAC_AC8WFRANXX_L001_001.R2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	G128-M11-B_GGCTAC_AC8WFRANXX_L001_001.R2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11126814
Sequences flagged as poor quality	0
Sequence length	50
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	359906	3.234582693662355	Illumina Single End PCR Primer 1 (100% over 50bp)
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	30454	0.27369919188008357	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17621	0.15836518881325778	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	47015	43.19455	1
TCGTGTA	47435	43.02428	14
ATCGGAA	46920	42.939728	2
AGAGCGT	48205	42.911663	8
GTCGTGT	49125	42.83835	13
TCTCGGT	47810	42.82064	36
CGTGTAG	47530	42.817944	15
GATCTCG	47370	42.69824	34
ATCTCGG	47370	42.637863	35
GTGGTCG	46865	42.563313	41
GTAGATC	47800	42.561512	31
CGTCGTG	49045	42.549385	12
AAGAGCG	47635	42.40471	7
GTAGGGA	46090	42.36123	18
TCGGTGG	48920	42.33604	38
CGGTGGT	48535	42.28452	39
TGTAGGG	48870	42.22928	17
CTCGGTG	47890	42.216236	37
GGTCGCC	46295	42.20687	43
GCGTCGT	49590	42.2056	11