G128-M7_CAGATC_BC8GTYANXX_L001_001.R2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	G128-M7_CAGATC_BC8GTYANXX_L001_001.R2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12600419
Sequences flagged as poor quality	0
Sequence length	50
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	842892	6.689396598636918	Illumina Single End PCR Primer 1 (100% over 50bp)
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	222756	1.767845974010864	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	60682	0.48158715991904716	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	15112	0.11993251970430507	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGTGTA	92225	43.42307	14
GATCGGA	93600	43.344074	1
GATCTCG	93455	43.29333	34
CGTGTAG	92815	43.264698	15
ATCTCGG	93595	43.23831	35
GTCGTGT	93175	43.238045	13
ATCGGAA	93625	43.219643	2
AGAGCGT	93885	43.202057	8
GTGGTCG	93475	43.161247	41
TCTCGGT	94065	43.125153	36
CGTCGTG	93465	43.104572	12
GCGTCGT	93445	43.094837	11
GTAGATC	94220	43.03298	31
GGTCGCC	93415	42.985497	43
TGGTCGC	93490	42.982243	42
TCGGTGG	94760	42.955593	38
GTAGGGA	93560	42.93917	18
CGGTGGT	94430	42.91972	39
AAGAGCG	94725	42.89615	7
CTCGGTG	94550	42.878517	37