G128-M6_GCCAAT_BC8GTYANXX_L001_001.R1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	G128-M6_GCCAAT_BC8GTYANXX_L001_001.R1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12121107
Sequences flagged as poor quality	0
Sequence length	50
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGCCAATATCTCGTATGC	409646	3.3796088096574013	TruSeq Adapter, Index 6 (100% over 50bp)
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	74542	0.6149768333865876	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20390	0.16821895887892088	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	52555	43.53688	1
ATCGGAA	53160	42.986267	2
CGTCTGA	53970	42.804634	16
ACACGTC	54005	42.802937	13
CGTATGC	52610	42.801926	44
ACGTCTG	54150	42.741283	15
CGCCAAT	52210	42.670586	33
CACACGT	53685	42.594593	12
GTCACGC	52640	42.56721	29
TCGGAAG	54095	42.5404	3
ACGCCAA	52750	42.53008	32
TCGTATG	53045	42.458637	43
CTCGTAT	52110	42.425766	42
CACGTCT	54540	42.405678	14
CGGAAGA	53800	42.27878	4
TATCTCG	48055	42.251633	39
AGTCACG	53415	42.20636	28
TCTCGTA	48880	41.888763	41
TCACGCC	53645	41.671665	30
GCCAATA	53210	41.564423	34