G128-M11_GGCTAC_BC8GTYANXX_L001_001.R2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	G128-M11_GGCTAC_BC8GTYANXX_L001_001.R2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10717620
Sequences flagged as poor quality	0
Sequence length	50
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	420247	3.921085091652811	Illumina Single End PCR Primer 1 (100% over 50bp)
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	57638	0.5377873072566484	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14864	0.13868750711445266	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	12307	0.11482959836232298	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGTGTA	48960	42.826714	14
GATCTCG	50035	42.81032	34
ATCTCGG	50065	42.7619	35
GTAGATC	50275	42.648518	31
TCTCGGT	50250	42.64784	36
GATCGGA	50030	42.57724	1
GTCGTGT	49735	42.47203	13
GTGGTCG	49865	42.448635	41
ATCGGAA	49925	42.437492	2
CGTGTAG	49725	42.396713	15
GTAGGGA	49710	42.31234	18
AGAGCGT	50510	42.30102	8
GAGTGTA	50660	42.293423	27
CGTCGTG	50185	42.24999	12
CTCGGTG	50675	42.208492	37
TCGGTGG	50970	42.111504	38
GGTCGCC	50110	42.09324	43
TAGATCT	50880	42.062206	32
AGTGTAG	51030	41.979126	28
GTGTAGG	50430	41.943413	16