G126-G127-M1M20-NEBNext18_GTCCGC-_AC8KUAANXX_L005

Basic Statistics

Measure	Value
Filename	G126-G127-M1M20-NEBNext18_GTCCGC-_AC8KUAANXX_L005_001.R1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6870843
Sequences flagged as poor quality	0
Sequence length	50
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	122082	1.7768125395966696	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTCCGCACATCTCGTAT	92049	1.3397046039328797	TruSeq Adapter, Index 18 (97% over 40bp)
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	58978	0.8583808420597007	No Hit
GAGCGGAAGAGCACACGTCTGAACTCCAGTCACGTCCGCACATCTCGTAT	15716	0.22873466909373422	TruSeq Adapter, Index 18 (97% over 40bp)
CTCAAAATTCTGTGACAGATTTTTGGTCAAGTTGTTTCCATTAAAAAGTA	8471	0.12328909276489071	No Hit
GTCTTTTTGTTATTTTGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8465	0.12320176723583992	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CTCGTAT	23000	42.754814	44
ACGTCCG	24970	42.497524	32
GTCACGT	25435	42.439354	29
CCGCACA	24805	42.25321	36
CGCACAT	21800	42.176624	37
AGTCACG	25820	42.090343	28
GTCCGCA	25270	41.659016	34
CATCTCG	21080	41.512478	41
TCTCGTA	21510	41.02027	43
TCACGTC	26770	40.92959	30
CAGTCAC	27190	40.51145	27
GCACATC	22040	40.484016	38
CGTCCGC	26455	40.266705	33
ACATCTC	22215	40.085903	40
CACGTCC	26995	39.936813	31
TCCGCAC	26480	39.90487	35
GCGGAAG	3555	39.886837	3
AGCGGAA	3205	39.782066	2
GAGCGGA	3190	39.442085	1
CGTCTGA	26920	38.82691	16