G116-M7_CAGATC_BC72YLANXX_L008_001.R2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	G116-M7_CAGATC_BC72YLANXX_L008_001.R2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	18888553
Sequences flagged as poor quality	0
Sequence length	50
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	324172	1.7162352245828465	Illumina Single End PCR Primer 1 (100% over 50bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCGCCG	36470	43.53187	44
AGCGTCG	37490	43.436317	10
CGTCGTG	37690	43.421738	12
GATCGGA	38175	43.36397	1
GCGTCGT	37675	43.35146	11
ATCGGAA	38245	43.13773	2
TGGTCGC	36820	42.983353	42
GAGCGTC	37870	42.924965	9
GTGGTCG	37220	42.87126	41
GTCGTGT	38240	42.84345	13
GGTCGCC	36970	42.83129	43
GATCTCG	38030	42.665806	34
AGAGCGT	38200	42.663315	8
TCGTGTA	37965	42.661926	14
AAGAGCG	38330	42.633038	7
TCGGTGG	38290	42.600243	38
TCGGAAG	38815	42.528603	3
CGGTGGT	38000	42.47362	39
TCTCGGT	38130	42.46156	36
CGTGTAG	38425	42.40317	15