FastQCFastQC Report
Fri 2 Jun 2017
G111C_M12.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG111C_M12.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18889420
Sequences flagged as poor quality0
Sequence length40
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA7100.014.1238721
ATCGGAA8150.012.095432
ACGACGC2651.4188117E-1011.54419716
CACGACG3001.09139364E-1010.76392315
CGTCTGA9650.010.56722716
CGACGCT3358.112693E-109.63907917
ACACGTC11650.08.3153913
ACGTCTG13850.07.485457415
TCGGAAG14550.07.3591643
CGGAAGA16400.06.3217444
CACGTCT17550.06.19785114
GCACACG20950.05.678533611
TACACGA6155.5090604E-65.526988513
Produced by FastQC (version 0.11.2)