FastQCFastQC Report
Thu 4 Jan 2024
G219M5_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG219M5_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19578724
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG708380.3618111170063994No Hit
AGGGTTTGAGAACTCCATTTCCCAGAGTGCTGTGCGGGTCGAGGGTGGTG292550.1494224036254865No Hit
GGGACAGGAGCTAAAGTCCAACTCTGTCAGCAAGCTGCTAGCCAGATGGG265260.1354838037453309No Hit
GGCAGGCGGGCGGGCGGGCAGTGTCCCTGAATTACTCAACAGAGCCATCT242750.12398662956789218No Hit
CCAAGCCGGTGGAGGGGGCGGGGGCCAGGAGGAGGGCCGTTTGCAGGGGA241080.12313366284748689No Hit
ACCAAGAGCAGGGAGAAGAGAACCATGAGGCCGATGTAGGTGGAGTGAGG215310.10997141591045463No Hit
TACGCCACAAAACACAGGGCAACAGATGCTCCGCAAATGCCCGTGTAGGA210820.10767811017714944No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)