FastQCFastQC Report
Thu 4 Jan 2024
G219M31_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG219M31_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19918993
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG788770.3959888936152545No Hit
AGACTAAGTGGCTGCTACTCGCTTGTCCAGCACAGATAGCTTCTTTCCCA320640.16097199291148903No Hit
GGGACAGGAGCTAAAGTCCAACTCTGTCAGCAAGCTGCTAGCCAGATGGG275100.13810939137334904No Hit
ATGGAAAAGCTGCCAGAACAAAGGGGTCAGCTCCAGCAGCAGGCACAGGC273250.1371806295629503No Hit
ACCGCCAGGAGCATAGGTCACACTGGCAGAAGGAAACTCTTATGGCCCCA264340.1327075118707055No Hit
TGAGAGTCAGCACACAGAGGCTATGGTCCAGGGGTGACCACGGTTCACTT257390.12921837966407237No Hit
GCTGCAGGAAGGACACTGGGGACCCTAACAGCCCTGAAGCCCTGGGGCAA239680.1203273679547957No Hit
AGGGTTTGAGAACTCCATTTCCCAGAGTGCTGTGCGGGTCGAGGGTGGTG231230.11608518563162304No Hit
TCCAATGGCAGGGACTTCACAGGTCACCCAAGTACACACACTGGCAGAGC224180.11254585008388727No Hit
TCGCTAAGTGTAAGACTGACACAGGCACAGGCAGAGCAGGTAGACAGGAA209690.10527138595811546No Hit
GGCAGGCGGGCGGGCGGGCAGTGTCCCTGAATTACTCAACAGAGCCATCT208180.10451331550746566No Hit
CAGCGGTGGCCTACCTGGTCACTGTTCAACCACCATGAATCAGCATGGAC202010.10141576936143308No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)