FastQCFastQC Report
Thu 4 Jan 2024
G219M31_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG219M31_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19918993
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCATGGAGAGTCCAAGAGCCAAACCCGGAGGTGAGCAGAGTCCAAGAGC328650.1649932805338101No Hit
CCACTCTTCCCTTCCCTTTGGGGCCTGAAGCCTTCTTGGTCTAATCTGTT259370.13021240581790455No Hit
CCTCATCCTGGATGCTGCTCTTGCCATGGAGTTGCTGTGTACCTCTTTGC257380.1292133593299621No Hit
CCTGTGTCCAGTCTAACAAAAAAGGCTTTGAGTGTTTTCAGTCTTGAAGA247760.12438379791588862No Hit
GGCTGGATGCTGCTTGTTGACTTGCTCCACATGAGCAGTGCCAAGCCTCA243190.12208950522749819No Hit
AGACAGGACACCCTCCAGCTCTGGTTCTTGATGACCTCAGCAGCTTCCCC240750.12086454370459392No Hit
GCTGCCTCTGCCGCCGCCTCCCCTGGGCTCCGGCCTCTTCCAGGCCGCGC230090.11551286754305301No Hit
TGTAGGCAGATGGGTCCTGGGTTGGCTGAAATGCTAAGAAGGGCACTGGG216200.10853962346389699No Hit
ACAACACCTCCCTCAGAGAAGGCTGCCGGGCCTTCCCTTAGTCCAGCTGA204370.10260056821145527No Hit
AAACCTGAGACGCACTGGGCTTAAAAGTAACTGAGCACTGAACTTAGGAG199700.10025607218196221No Hit
GCTTCCCAGTCTGTGTTCTCCCACTTGGGGGGTAGAGGAACGGCAGACTT199200.10000505547644904No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)