FastQCFastQC Report
Thu 4 Jan 2024
G219M12_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG219M12_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20742635
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG804990.38808473465401094No Hit
GGCAGGCGGGCGGGCGGGCAGTGTCCCTGAATTACTCAACAGAGCCATCT261220.1259338555588526No Hit
AGGGTTTGAGAACTCCATTTCCCAGAGTGCTGTGCGGGTCGAGGGTGGTG246190.11868791019077372No Hit
TACGCCACAAAACACAGGGCAACAGATGCTCCGCAAATGCCCGTGTAGGA245810.1185047126365575No Hit
GGGACAGGAGCTAAAGTCCAACTCTGTCAGCAAGCTGCTAGCCAGATGGG244800.11801779282140383No Hit
CCAAGCCGGTGGAGGGGGCGGGGGCCAGGAGGAGGGCCGTTTGCAGGGGA225600.10876149534521529No Hit
CAGGAGGTGCACAACATCACAGTACAGGCACCCAGAGTCTCCCTGGCCTT222450.10724288404052812No Hit
AAGGACAGGTAAAGTCCAAAGTGAGGGAGTGAGTCACTGCCTTCACAGGC219370.10575801965372288No Hit
CAGGTGCCGGCCGCGACCCTCTTCTCAGAGCCCGTTTCTCTTCGGACCCC211940.10217602536996867No Hit
GCTGCAGGAAGGACACTGGGGACCCTAACAGCCCTGAAGCCCTGGGGCAA209740.10111540795082205No Hit
AACCTTGAAAGCTGCAAAAGAGAAACAGCACGTCCCAACAAGGGAGGCAT208920.10072008691277652No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)