FastQCFastQC Report
Thu 18 May 2023
G202M6_CKDL230013148-1A_H5NKYDSX7_L1_R2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG202M6_CKDL230013148-1A_H5NKYDSX7_L1_R2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15190677
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGGAGGATGAGGAGGAGGAGGAAGAAGAGGAGGAAGAAGAAGAAGAA348860.22965401739501146No Hit
GGGCAGAGGGCAGAGGGTAAGGGCAGAGGGTAAAGGGTAGCAGGAGGCAG335850.22108955380987955No Hit
GAGAGATAGGAGTGCCCAGCCAGCCACAAAGGCAGAAGAAAAAACACACG305370.2010246152952893No Hit
AACTATAGCTTTAAAGCCACAGAAAAATATAAAACCAAATAGTGTAGATA296670.19529741827832953No Hit
CTCCTGAGCAAACCCTGCAGGACAGGAGACATGACAAATGGTGGGATTGT294440.19382941260616626No Hit
CTGGAATCAGACGCCCACAGGAGCCAGGCAGGACACACAGGGCCTGTGCT270530.17808949528714224No Hit
AGGGTAATCTGAGTCCAAGGCCATTCTGGTCTGCAGAGTGCATTCCAGGA254630.16762254901476742No Hit
TTGCAACTCCAACCCCAGAGGATCTGACACCTCTTATGGTGTCATTCAGA244420.16090132125118584No Hit
GGCCAGTGGGCAGAGGGCAGAGGGTAAGGGCAGAGGGTAAAGGGTAGCAG222730.1466228266192481No Hit
GAGCTGGGGGGGAAAAAAACTGAGCTGCCAGATGTCAAAGTAGCCAAAGT217260.1430219337821481No Hit
TAGGGAAGTATGACATTCCTGGCTGCAGACCAACTCCACATAACCCTGGA215120.1416131749756775No Hit
CCCGTTTTCTAAGCCAAACTGAATTCACATTATCAGATATTTTCAAACTA190950.12570210004465238No Hit
GGGCAATGTCACAGGAGAGGCAGTCTGTGTATTTGAGGAGTGTCAGGAAA181680.11959967287830556No Hit
GCACAATGGGGCCCAATCATAGAAGAGACAGCAGGGCCTGGTCACCCTGC175420.11547872422012527No Hit
GCCCACCACCCAGCAGAGGTAGTGGAAGAGAAAAGATATCAGGATATGGG174610.1149455024288911No Hit
AAACAGACATCTGACACACAAGAAGGAAAAGGCCACGGAGACCAAGCATT169220.1113972734724068No Hit
ACCAGCCCACAGCTGAGTGTGCCTCCCAGTGAACCCTGAAGCTGGGCTGT165520.10896156899392964No Hit
GCCAAGCTGCACCCCCATGACCTACTTAATCCAACCAGGCCAAGCCCCAC164830.10850734302361902No Hit
GGGTTCCCACCTGGCCAGAGCCAGGAGGAGCATCGAGCAGGAGGCGGGCC161170.10609797048544974No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG160060.10536725914190657No Hit
TTTAAGATTTGCAGATCAAGGTCCATATTTGACCATGGGAATCGTGTAAG159420.1049459480969808No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)