FastQCFastQC Report
Thu 18 May 2023
G202M5_CKDL230013148-1A_H5NKYDSX7_L1_R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG202M5_CKDL230013148-1A_H5NKYDSX7_L1_R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12829123
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGTCCAGCAATATTTCAAATCTAAGTTTGCTCTGAGTCAACTACAGACC385010.3001062504428401No Hit
TCATGGAAGGTCAGCTTTGAGGTTTCAGAAGCCCATACCATTCCCAGTTA326380.25440554276391303No Hit
AGGCTATCACTGGCTTCCCTTTTGTCTACATAAATGCTTTCACGGGCCTG289790.22588449732690224No Hit
GGCTGGCGTCTGAAGCCCCAGCCTAGCAGCATCGGACCTGAGTTCCTCTG288400.2248010249804293No Hit
AGGTCAGCTTTGAGGTTTCAGAAGCCCATACCATTCCCAGTTAGCTCTCT257270.2005359212784849No Hit
CGGCTTGCTTGCTTGCTCGCTTTCAGATCTCTAAAGGCATCTTGGTTTCT224190.17475083838544536No Hit
CCTCCCACCCCTGGGCTGTACCTGCCACAACCTTCTCTGCGTGACCTGTG200770.15649549856213865No Hit
ACAGGTATCCACAACTGGCTCTAGAGTAGATCCAAGTACACCTTCATCTC191100.1489579607273233No Hit
TTCCTGTGATTTTTTTTTCTCTTCCAGAGTTCAAAAACTGGTGACGAAAG174400.1359407030394829No Hit
ATGTGTGACCCCTCAAAGGGAGGAGATTCCGTGGCGCGGTGGCAGTGGCC172260.13427262331181952No Hit
CTCCTGCCTGATGGAGTATCGATTCTCCGAGTGCAAAGTCCAGCATGCCG166800.13001668157675314No Hit
TGACTTAGGAGGAAGGTCAGAAAAACATGGTGATTTCGGGCACAGAATCT161270.125706176486109No Hit
TCAATCAGTGGCATCAATTTGAACAAATTATTGAGAAATGATAAAGCTGT157220.12254929662768063No Hit
CCTGCCTAGTGTCTGCCTGCCGAGAGGACTGGACTGGACTGTTGCTGAGT152970.1192365214676015No Hit
AGAGCAGACTGGGGGCTGGGGATCTGATTATTGACAGGGGAGGAGAGAAC147920.11530016510091921No Hit
AAATTAAGCTGATTAGCCCTGAAAGCGCTTGGCGGTTTCCACCCCCTTAT147890.11527678080567161No Hit
ATAATTACCAGGGCTTCACCTTTTGGCCACTATACTGTTAATTTGCAGTT141390.11021018350202115No Hit
TGATGCTTTACCTTCATCACTGATGCGAACATCCAGCTTCTCTCTGACTC140870.10980485571772909No Hit
AAAGCAAAGGTACTGAGTCCTGTGTGTCATCATTTCTAAGAGCTCCCTGG137800.10741186283738959No Hit
TTAGCTCCAGACTGACACAAATGGTTTGAAGCCTGTTGTTTGCTGCTTCT135260.10543199250642463No Hit
TCACTGGTGATGAGAAACATTGCATGGAGGGCTTCAGAGTCAGAGGCCTT133010.10367817036285333No Hit
GGTTGATTTCTCTGACCCTCAACTGGCCTGATTAGAAGACCTGGCATTCT128310.10001463077405992No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)