FastQCFastQC Report
Thu 18 May 2023
G202M11_CKDL230013148-1A_H5NKYDSX7_L1_R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG202M11_CKDL230013148-1A_H5NKYDSX7_L1_R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14125962
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTTGCTTGCTTGCTCGCTTTCAGATCTCTAAAGGCATCTTGGTTTCT262370.18573602279264237No Hit
TGATGCTTTACCTTCATCACTGATGCGAACATCCAGCTTCTCTCTGACTC256530.18160179108509567No Hit
GGCTGGCGTCTGAAGCCCCAGCCTAGCAGCATCGGACCTGAGTTCCTCTG250730.1774958760330801No Hit
ACAGGTATCCACAACTGGCTCTAGAGTAGATCCAAGTACACCTTCATCTC230230.16298359007336985No Hit
CCAACACAAAACCCCAAGAAAAATCATTGGTTCACCAAGTTGGGCTTTGG224610.15900509997124443No Hit
AAGTCCAGCAATATTTCAAATCTAAGTTTGCTCTGAGTCAACTACAGACC213820.15136668214171892No Hit
AGGCTATCACTGGCTTCCCTTTTGTCTACATAAATGCTTTCACGGGCCTG205200.14526444287475784No Hit
CCTCCCACCCCTGGGCTGTACCTGCCACAACCTTCTCTGCGTGACCTGTG200950.14225579822457401No Hit
GCCATTGATTGACATGAGGCACTGGGCCAGACAGATGAATTTCTCTGGTT166470.11784684115672972No Hit
TCATGGAAGGTCAGCTTTGAGGTTTCAGAAGCCCATACCATTCCCAGTTA157600.11156762279269901No Hit
TATAAAATCAAGGATTGATCAAGGCTGTGGACTTTGGTTCTTATCACTTG155880.1103500066048599No Hit
CTCCTGCCTGATGGAGTATCGATTCTCCGAGTGCAAAGTCCAGCATGCCG153360.10856605730639797No Hit
TTATGGAAAAAGTCAACAACAGGAGTCAGAGCAGCCGGAAAAGCATGGAC153130.1084032365370939No Hit
TCTAGTTGAAAGAGAGATTAAACAATGTTTGATTAGTCAAGAATGTTCCA149900.1061166666029542No Hit
TTCCTGTGATTTTTTTTTCTCTTCCAGAGTTCAAAAACTGGTGACGAAAG147080.1041203423880087No Hit
GCTTGTCTGTCTGCAATTTTACTCCTCAGTGTTCCCCCTCCAGATGTATG146480.10369559255504156No Hit
ATGCTTTCCTTTATTTGAGTTTCTGTGGTCATGGTGCCACTTCATACCAC142720.10103382693511423No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)