Sample Bowtie 2 / HiSAT2_mqc-generalstats-bowtie_2_hisat2-overall_alignment_rate FastQC_mqc-generalstats-fastqc-percent_duplicates FastQC_mqc-generalstats-fastqc-percent_gc FastQC_mqc-generalstats-fastqc-avg_sequence_length FastQC_mqc-generalstats-fastqc-percent_fails FastQC_mqc-generalstats-fastqc-total_sequences MACS2_mqc-generalstats-macs2-d MACS2_mqc-generalstats-macs2-peak_count Picard_mqc-generalstats-picard-summed_median Picard_mqc-generalstats-picard-summed_mean Samtools_mqc-generalstats-samtools-flagstat_total Samtools_mqc-generalstats-samtools-mapped_passed G215M10_CKDL230032530-1A_H77VKDSX7_L3_R1 96.04 19.610720576193543 40.0 150.0 18.181818181818183 4886339.0 G215M10_CKDL230032530-1A_H77VKDSX7_L3_R2 18.641086065998977 40.0 150.0 18.181818181818183 4886339.0 G215M10_broad_MACS2 304.0 15173 G215M10_narrow_MACS2 304.0 2620 G215M10_sorted_mapped 296 304.83119 G215M11_CKDL230032530-1A_H77VKDSX7_L3_R1 95.63 18.04755320667026 42.0 150.0 9.090909090909092 6415755.0 G215M11_CKDL230032530-1A_H77VKDSX7_L3_R2 17.325139102068505 42.0 150.0 9.090909090909092 6415755.0 G215M11_broad_MACS2 299.0 6596 G215M11_narrow_MACS2 299.0 1313 G215M11_sorted_mapped 291 300.08111 G215M12_CKDL230032530-1A_H77VKDSX7_L3_R1 95.82 17.176816502773278 44.0 150.0 0.0 8279153.0 G215M12_CKDL230032530-1A_H77VKDSX7_L3_R2 16.687468733918337 44.0 150.0 0.0 8279153.0 G215M12_broad_MACS2 292.0 24812 G215M12_narrow_MACS2 292.0 10857 G215M12_sorted_mapped 283 293.02668 G215M13_CKDL230032530-1A_H77VKDSX7_L3_R1 95.27 15.865115661054404 46.0 150.0 0.0 10847773.0 G215M13_CKDL230032530-1A_H77VKDSX7_L3_R2 15.558398275285327 46.0 150.0 0.0 10847773.0 G215M13_broad_MACS2 269.0 24457 G215M13_narrow_MACS2 269.0 18706 G215M13_sorted_mapped 256 269.473255 G215M15_CKDL230032530-1A_H77VKDSX7_L3_R1 93.75 15.83040717478363 45.0 150.0 0.0 7974568.0 G215M15_CKDL230032530-1A_H77VKDSX7_L3_R2 15.121793203683382 45.0 150.0 0.0 7974568.0 G215M15_broad_MACS2 269.0 18122 G215M15_narrow_MACS2 269.0 13795 G215M15_sorted_mapped 256 270.122521 G215M16_CKDL230032530-1A_H77VKDSX7_L3_R1 92.66 17.807538173045785 43.0 150.0 18.181818181818183 8110397.0 G215M16_CKDL230032530-1A_H77VKDSX7_L3_R2 17.47332249951006 43.0 150.0 18.181818181818183 8110397.0 G215M16_broad_MACS2 256.0 14625 G215M16_narrow_MACS2 256.0 10347 G215M16_sorted_mapped 241 256.724023 G215M5_CKDL230032530-1A_H77VKDSX7_L3_R1 93.47 17.61641225689678 43.0 150.0 9.090909090909092 6602096.0 G215M5_CKDL230032530-1A_H77VKDSX7_L3_R2 17.05021280525935 42.0 150.0 9.090909090909092 6602096.0 G215M5_broad_MACS2 286.0 3627 G215M5_narrow_MACS2 286.0 525 G215M5_sorted_mapped 275 286.729939 G215M6_CKDL230032530-1A_H77VKDSX7_L3_R1 93.71 20.39458660270205 42.0 150.0 9.090909090909092 8470581.0 G215M6_CKDL230032530-1A_H77VKDSX7_L3_R2 19.81827506616189 42.0 150.0 9.090909090909092 8470581.0 G215M6_broad_MACS2 275.0 8382 G215M6_narrow_MACS2 275.0 1461 G215M6_sorted_mapped 263 276.218892 G215M7_CKDL230032530-1A_H77VKDSX7_L3_R1 94.08 20.279455959133116 43.0 150.0 9.090909090909092 11087894.0 G215M7_CKDL230032530-1A_H77VKDSX7_L3_R2 19.5844394612632 43.0 150.0 9.090909090909092 11087894.0 G215M7_broad_MACS2 279.0 8029 G215M7_narrow_MACS2 279.0 1622 G215M7_sorted_mapped 266 279.840131 G215M8_CKDL230032530-1A_H77VKDSX7_L3_R1 94.15 19.933187821201628 42.0 150.0 9.090909090909092 9231786.0 G215M8_CKDL230032530-1A_H77VKDSX7_L3_R2 19.57167902586488 42.0 150.0 9.090909090909092 9231786.0 G215M8_broad_MACS2 264.0 3998 G215M8_narrow_MACS2 264.0 2354 G215M8_sorted_mapped 250 264.840722 G215M9_CKDL230032530-1A_H77VKDSX7_L3_R1 96.15 19.52812871116953 39.0 150.0 9.090909090909092 4184115.0 G215M9_CKDL230032530-1A_H77VKDSX7_L3_R2 18.529705157897283 39.0 150.0 9.090909090909092 4184115.0 G215M9_broad_MACS2 305.0 11107 G215M9_narrow_MACS2 305.0 1926 G215M9_sorted_mapped 299 306.075777 README_Bowtie2.sh 95.16 flagstat_G215M10 9772678 9385760 flagstat_G215M11 12831510 12271321 flagstat_G215M12 16558306 15865376 flagstat_G215M13 21695546 20670047 flagstat_G215M15 15949136 14951776 flagstat_G215M16 16220794 15029924 flagstat_G215M5 13204192 12342513 flagstat_G215M6 16941162 15876192 flagstat_G215M7 22175788 20862372 flagstat_G215M8 18463572 17383798 flagstat_G215M9 8368230 8046420