Sample total_passed total_failed duplicates_passed duplicates_failed mapped_passed mapped_failed mapped_passed_pct mapped_failed_pct paired in sequencing_passed paired in sequencing_failed read1_passed read1_failed read2_passed read2_failed properly paired_passed properly paired_failed properly paired_passed_pct properly paired_failed_pct with itself and mate mapped_passed with itself and mate mapped_failed singletons_passed singletons_failed singletons_passed_pct singletons_failed_pct with mate mapped to a different chr_passed with mate mapped to a different chr_failed with mate mapped to a different chr (mapQ >= 5)_passed with mate mapped to a different chr (mapQ >= 5)_failed flagstat_total flagstat_G215M1 7288592 0 0 0 6860227 0 94.12 nan 7288592 0 3644296 0 3644296 0 5769254 0 79.15 nan 6710428 0 149799 0 2.06 nan 87314 0 45789 0 7288592 flagstat_G215M2 18077168 0 0 0 17101421 0 94.6 nan 18077168 0 9038584 0 9038584 0 15170356 0 83.92 nan 16793316 0 308105 0 1.7 nan 122434 0 51343 0 18077168 flagstat_G215M3 20475870 0 0 0 19388623 0 94.69 nan 20475870 0 10237935 0 10237935 0 17078304 0 83.41 nan 19033996 0 354627 0 1.73 nan 161228 0 71779 0 20475870 flagstat_G215M4 18039556 0 0 0 17188418 0 95.28 nan 18039556 0 9019778 0 9019778 0 15566378 0 86.29 nan 16902854 0 285564 0 1.58 nan 121562 0 57631 0 18039556