Module Section Sample Name Source Bowtie 2 / HiSAT2 all_sections G208M13_CKDL230025721-1A_HGLT2DSX7_L1_R1_val_1 /projectnb/wax-dk/max/G208_SG_CUTRUN_K27ac/Scripts/04_Bowtie2/Step_04_G208_SG_CUTRUN_K27ac_TRIMMED_STRONG_G208M13_TRIM1.o101640 Bowtie 2 / HiSAT2 all_sections G208M14_CKDL230025721-1A_HGLT2DSX7_L1_R1_val_1 /projectnb/wax-dk/max/G208_SG_CUTRUN_K27ac/Scripts/04_Bowtie2/Step_04_G208_SG_CUTRUN_K27ac_TRIMMED_STRONG_G208M14_TRIM1.o101641 Bowtie 2 / HiSAT2 all_sections G208M12_CKDL230025721-1A_HGLT2DSX7_L1_R1_val_1 /projectnb/wax-dk/max/G208_SG_CUTRUN_K27ac/Scripts/04_Bowtie2/Step_04_G208_SG_CUTRUN_K27ac_TRIMMED_STRONG_G208M12_TRIM1.o101639 Bowtie 2 / HiSAT2 all_sections README_Bowtie2.sh /projectnb/wax-dk/max/G208_SG_CUTRUN_K27ac/Scripts/04_Bowtie2/README_Bowtie2.sh Bowtie 2 / HiSAT2 all_sections G208M11_CKDL230025721-1A_HGLT2DSX7_L1_R1_val_1 /projectnb/wax-dk/max/G208_SG_CUTRUN_K27ac/Scripts/04_Bowtie2/Step_04_G208_SG_CUTRUN_K27ac_TRIMMED_STRONG_G208M11_TRIM1.o101638 FastQC all_sections G208M13_CKDL230025721-1A_HGLT2DSX7_L1_R1_val_1 /projectnb/wax-dk/max/G208_SG_CUTRUN_K27ac/Scripts/02_FASTQC/Job_Summary/G208M13_TRIM1_FASTQC/G208M13_CKDL230025721-1A_HGLT2DSX7_L1_R1_val_1_fastqc.zip FastQC all_sections G208M13_CKDL230025721-1A_HGLT2DSX7_L1_R2_val_2 /projectnb/wax-dk/max/G208_SG_CUTRUN_K27ac/Scripts/02_FASTQC/Job_Summary/G208M13_TRIM1_FASTQC/G208M13_CKDL230025721-1A_HGLT2DSX7_L1_R2_val_2_fastqc.zip FastQC all_sections G208M11_CKDL230025721-1A_HGLT2DSX7_L1_R2_val_2 /projectnb/wax-dk/max/G208_SG_CUTRUN_K27ac/Scripts/02_FASTQC/Job_Summary/G208M11_TRIM1_FASTQC/G208M11_CKDL230025721-1A_HGLT2DSX7_L1_R2_val_2_fastqc.zip FastQC all_sections G208M11_CKDL230025721-1A_HGLT2DSX7_L1_R1_val_1 /projectnb/wax-dk/max/G208_SG_CUTRUN_K27ac/Scripts/02_FASTQC/Job_Summary/G208M11_TRIM1_FASTQC/G208M11_CKDL230025721-1A_HGLT2DSX7_L1_R1_val_1_fastqc.zip FastQC all_sections G208M14_CKDL230025721-1A_HGLT2DSX7_L1_R1_val_1 /projectnb/wax-dk/max/G208_SG_CUTRUN_K27ac/Scripts/02_FASTQC/Job_Summary/G208M14_TRIM1_FASTQC/G208M14_CKDL230025721-1A_HGLT2DSX7_L1_R1_val_1_fastqc.zip FastQC all_sections G208M14_CKDL230025721-1A_HGLT2DSX7_L1_R2_val_2 /projectnb/wax-dk/max/G208_SG_CUTRUN_K27ac/Scripts/02_FASTQC/Job_Summary/G208M14_TRIM1_FASTQC/G208M14_CKDL230025721-1A_HGLT2DSX7_L1_R2_val_2_fastqc.zip FastQC all_sections G208M12_CKDL230025721-1A_HGLT2DSX7_L1_R1_val_1 /projectnb/wax-dk/max/G208_SG_CUTRUN_K27ac/Scripts/02_FASTQC/Job_Summary/G208M12_TRIM1_FASTQC/G208M12_CKDL230025721-1A_HGLT2DSX7_L1_R1_val_1_fastqc.zip FastQC all_sections G208M12_CKDL230025721-1A_HGLT2DSX7_L1_R2_val_2 /projectnb/wax-dk/max/G208_SG_CUTRUN_K27ac/Scripts/02_FASTQC/Job_Summary/G208M12_TRIM1_FASTQC/G208M12_CKDL230025721-1A_HGLT2DSX7_L1_R2_val_2_fastqc.zip