Sample	total_reads	paired_total	paired_aligned_none	paired_aligned_one	paired_aligned_multi	paired_aligned_discord_one	paired_aligned_mate_none	paired_aligned_mate_one	paired_aligned_mate_multi	overall_alignment_rate	paired_aligned_mate_multi_halved	paired_aligned_mate_none_halved	paired_aligned_mate_one_halved
G208M11_CKDL230025721-1A_HGLT2DSX7_L1_R1_val_1	1543645	1543645	372474	1080564	90607	282579	62838	54043	62909	97.96	31454.5	31419.0	27021.5
G208M12_CKDL230025721-1A_HGLT2DSX7_L1_R1_val_1	1504491	1504491	332361	1094769	77361	256747	55636	46200	49392	98.15	24696.0	27818.0	23100.0
G208M13_CKDL230025721-1A_HGLT2DSX7_L1_R1_val_1	1675370	1675370	419551	1134498	121321	319777	60126	54744	84678	98.21	42339.0	30063.0	27372.0
G208M14_CKDL230025721-1A_HGLT2DSX7_L1_R1_val_1	1363052	1363052	282124	1006065	74863	215220	49953	41654	42201	98.17	21100.5	24976.5	20827.0
README_Bowtie2.sh	250000	250000								95.16