Sample Bowtie 2 / HiSAT2_mqc-generalstats-bowtie_2_hisat2-overall_alignment_rate FastQC_mqc-generalstats-fastqc-percent_duplicates FastQC_mqc-generalstats-fastqc-percent_gc FastQC_mqc-generalstats-fastqc-avg_sequence_length FastQC_mqc-generalstats-fastqc-percent_fails FastQC_mqc-generalstats-fastqc-total_sequences G208M11_CKDL230025721-1A_HGLT2DSX7_L1_R1_val_1 97.96 9.488674360220301 46.0 150.0 9.090909090909092 1543645.0 G208M11_CKDL230025721-1A_HGLT2DSX7_L1_R2_val_2 8.876246017387473 46.0 150.0 9.090909090909092 1543645.0 G208M12_CKDL230025721-1A_HGLT2DSX7_L1_R1_val_1 98.15 9.68207112828469 46.0 150.0 9.090909090909092 1504491.0 G208M12_CKDL230025721-1A_HGLT2DSX7_L1_R2_val_2 9.027557798753847 46.0 150.0 9.090909090909092 1504491.0 G208M13_CKDL230025721-1A_HGLT2DSX7_L1_R1_val_1 98.21 9.836675619577377 46.0 150.0 9.090909090909092 1675370.0 G208M13_CKDL230025721-1A_HGLT2DSX7_L1_R2_val_2 9.23401675203462 46.0 150.0 9.090909090909092 1675370.0 G208M14_CKDL230025721-1A_HGLT2DSX7_L1_R1_val_1 98.17 8.826747780588192 46.0 150.0 9.090909090909092 1363052.0 G208M14_CKDL230025721-1A_HGLT2DSX7_L1_R2_val_2 8.385351623646258 47.0 150.0 9.090909090909092 1363052.0 README_Bowtie2.sh 95.16