Module	Section	Sample Name	Source
MACS2	all_sections	G207M08_narrow_MACS2	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/G207M08/fastq/bowtie2/G207M08_MACS2_output/G207M08_narrow_MACS2_peaks.xls
MACS2	all_sections	G207M08_broad_MACS2	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/G207M08/fastq/bowtie2/G207M08_MACS2_output/G207M08_broad_MACS2_peaks.xls
MACS2	all_sections	G207M05_narrow_MACS2	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/G207M05/fastq/bowtie2/G207M05_MACS2_output/G207M05_narrow_MACS2_peaks.xls
MACS2	all_sections	G207M05_broad_MACS2	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/G207M05/fastq/bowtie2/G207M05_MACS2_output/G207M05_broad_MACS2_peaks.xls
MACS2	all_sections	G207M07_broad_MACS2	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/G207M07/fastq/bowtie2/G207M07_MACS2_output/G207M07_broad_MACS2_peaks.xls
MACS2	all_sections	G207M07_narrow_MACS2	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/G207M07/fastq/bowtie2/G207M07_MACS2_output/G207M07_narrow_MACS2_peaks.xls
MACS2	all_sections	G207M06_narrow_MACS2	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/G207M06/fastq/bowtie2/G207M06_MACS2_output/G207M06_narrow_MACS2_peaks.xls
MACS2	all_sections	G207M06_broad_MACS2	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/G207M06/fastq/bowtie2/G207M06_MACS2_output/G207M06_broad_MACS2_peaks.xls
Picard	InsertSizeMetrics	G207M08_sorted_mapped	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/G207M08/fastq/bowtie2/CollectInsertSizeMetrics/G207M08_metrics
Picard	InsertSizeMetrics	G207M05_sorted_mapped	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/G207M05/fastq/bowtie2/CollectInsertSizeMetrics/G207M05_metrics
Picard	InsertSizeMetrics	G207M07_sorted_mapped	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/G207M07/fastq/bowtie2/CollectInsertSizeMetrics/G207M07_metrics
Picard	InsertSizeMetrics	G207M06_sorted_mapped	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/G207M06/fastq/bowtie2/CollectInsertSizeMetrics/G207M06_metrics
Samtools	flagstat	flagstat_G207M08	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/G207M08/fastq/bowtie2/flagstat_G207M08.txt
Samtools	flagstat	flagstat_G207M05	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/G207M05/fastq/bowtie2/flagstat_G207M05.txt
Samtools	flagstat	flagstat_G207M07	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/G207M07/fastq/bowtie2/flagstat_G207M07.txt
Samtools	flagstat	flagstat_G207M06	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/G207M06/fastq/bowtie2/flagstat_G207M06.txt
Samtools	idxstats	G207M08_idxstats	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/Scripts/05_BAM_Count/Job_Summary/Chr_Read_Counts/G207M08_idxstats.out
Samtools	idxstats	G207M05_idxstats	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/Scripts/05_BAM_Count/Job_Summary/Chr_Read_Counts/G207M05_idxstats.out
Samtools	idxstats	G207M07_idxstats	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/Scripts/05_BAM_Count/Job_Summary/Chr_Read_Counts/G207M07_idxstats.out
Samtools	idxstats	G207M06_idxstats	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/Scripts/05_BAM_Count/Job_Summary/Chr_Read_Counts/G207M06_idxstats.out
Bowtie 2 / HiSAT2	all_sections	G207M5_CKDL230025720-1A_HGLT2DSX7_L1_R1	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/Scripts/04_Bowtie2/Step_04_G207_K9me3_G207M05.o43666
Bowtie 2 / HiSAT2	all_sections	G207M8_CKDL230025720-1A_HGLT2DSX7_L1_R1	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/Scripts/04_Bowtie2/Step_04_G207_K9me3_G207M08.o43669
Bowtie 2 / HiSAT2	all_sections	G207M7_CKDL230025720-1A_HGLT2DSX7_L1_R1	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/Scripts/04_Bowtie2/Step_04_G207_K9me3_G207M07.o43668
Bowtie 2 / HiSAT2	all_sections	README_Bowtie2.sh	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/Scripts/04_Bowtie2/README_Bowtie2.sh
Bowtie 2 / HiSAT2	all_sections	G207M6_CKDL230025720-1A_HGLT2DSX7_L1_R1	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/Scripts/04_Bowtie2/Step_04_G207_K9me3_G207M06.o43667
FastQC	all_sections	G207M5_CKDL230025720-1A_HGLT2DSX7_L1_R2	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/Scripts/02_FASTQC/Job_Summary/G207M05_FASTQC/G207M5_CKDL230025720-1A_HGLT2DSX7_L1_R2_fastqc.zip
FastQC	all_sections	G207M5_CKDL230025720-1A_HGLT2DSX7_L1_R1	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/Scripts/02_FASTQC/Job_Summary/G207M05_FASTQC/G207M5_CKDL230025720-1A_HGLT2DSX7_L1_R1_fastqc.zip
FastQC	all_sections	G207M6_CKDL230025720-1A_HGLT2DSX7_L1_R1	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/Scripts/02_FASTQC/Job_Summary/G207M06_FASTQC/G207M6_CKDL230025720-1A_HGLT2DSX7_L1_R1_fastqc.zip
FastQC	all_sections	G207M6_CKDL230025720-1A_HGLT2DSX7_L1_R2	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/Scripts/02_FASTQC/Job_Summary/G207M06_FASTQC/G207M6_CKDL230025720-1A_HGLT2DSX7_L1_R2_fastqc.zip
FastQC	all_sections	G207M7_CKDL230025720-1A_HGLT2DSX7_L1_R2	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/Scripts/02_FASTQC/Job_Summary/G207M07_FASTQC/G207M7_CKDL230025720-1A_HGLT2DSX7_L1_R2_fastqc.zip
FastQC	all_sections	G207M7_CKDL230025720-1A_HGLT2DSX7_L1_R1	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/Scripts/02_FASTQC/Job_Summary/G207M07_FASTQC/G207M7_CKDL230025720-1A_HGLT2DSX7_L1_R1_fastqc.zip
FastQC	all_sections	G207M8_CKDL230025720-1A_HGLT2DSX7_L1_R2	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/Scripts/02_FASTQC/Job_Summary/G207M08_FASTQC/G207M8_CKDL230025720-1A_HGLT2DSX7_L1_R2_fastqc.zip
FastQC	all_sections	G207M8_CKDL230025720-1A_HGLT2DSX7_L1_R1	/projectnb2/wax-dk/max/G207_SG_CHIPSEQ_K9me3/Scripts/02_FASTQC/Job_Summary/G207M08_FASTQC/G207M8_CKDL230025720-1A_HGLT2DSX7_L1_R1_fastqc.zip