Sample MACS2_mqc-generalstats-macs2-d MACS2_mqc-generalstats-macs2-peak_count Picard_mqc-generalstats-picard-summed_median Picard_mqc-generalstats-picard-summed_mean Bowtie 2 / HiSAT2_mqc-generalstats-bowtie_2_hisat2-overall_alignment_rate FastQC_mqc-generalstats-fastqc-percent_duplicates FastQC_mqc-generalstats-fastqc-percent_gc FastQC_mqc-generalstats-fastqc-avg_sequence_length FastQC_mqc-generalstats-fastqc-percent_fails FastQC_mqc-generalstats-fastqc-total_sequences Samtools_mqc-generalstats-samtools-flagstat_total Samtools_mqc-generalstats-samtools-mapped_passed G207M01_broad_MACS2 291.0 37119 G207M01_narrow_MACS2 291.0 35944 G207M01_sorted_mapped 281 291.804786 G207M02_broad_MACS2 289.0 33102 G207M02_narrow_MACS2 289.0 30319 G207M02_sorted_mapped 279 289.622247 G207M03_broad_MACS2 308.0 24974 G207M03_narrow_MACS2 308.0 17850 G207M03_sorted_mapped 302 309.045316 G207M04_broad_MACS2 289.0 31204 G207M04_narrow_MACS2 289.0 28904 G207M04_sorted_mapped 281 290.053156 G207M1_CKDL230025720-1A_HGLT2DSX7_L1_R1 95.06 12.38148053565753 47.0 150.0 0.0 11560563.0 G207M1_CKDL230025720-1A_HGLT2DSX7_L1_R2 11.690263916196514 47.0 150.0 0.0 11560563.0 G207M2_CKDL230025720-1A_HGLT2DSX7_L1_R1 96.1 11.953026375908522 45.0 150.0 0.0 10963341.0 G207M2_CKDL230025720-1A_HGLT2DSX7_L1_R2 11.435215761511813 45.0 150.0 0.0 10963341.0 G207M3_CKDL230025720-1A_HGLT2DSX7_L1_R1 95.22 12.176045560730657 43.0 150.0 0.0 9138424.0 G207M3_CKDL230025720-1A_HGLT2DSX7_L1_R2 11.185191377920162 44.0 150.0 0.0 9138424.0 G207M4_CKDL230025720-1A_HGLT2DSX7_L1_R1 96.12 11.955076368071417 45.0 150.0 0.0 10026289.0 G207M4_CKDL230025720-1A_HGLT2DSX7_L1_R2 11.432111240963778 45.0 150.0 0.0 10026289.0 README_Bowtie2.sh 95.16 flagstat_G207M01 23121126 21978862 flagstat_G207M02 21926682 21070568 flagstat_G207M03 18276848 17403033 flagstat_G207M04 20052578 19273617