Sample FastQC_mqc-generalstats-fastqc-percent_duplicates FastQC_mqc-generalstats-fastqc-percent_gc FastQC_mqc-generalstats-fastqc-avg_sequence_length FastQC_mqc-generalstats-fastqc-percent_fails FastQC_mqc-generalstats-fastqc-total_sequences STAR_mqc-generalstats-star-uniquely_mapped_percent STAR_mqc-generalstats-star-uniquely_mapped Picard_mqc-generalstats-picard-PCT_RIBOSOMAL_BASES Picard_mqc-generalstats-picard-PCT_MRNA_BASES Picard_mqc-generalstats-picard-summed_median Picard_mqc-generalstats-picard-summed_mean featureCounts_mqc-generalstats-featurecounts-percent_assigned featureCounts_mqc-generalstats-featurecounts-Assigned Samtools_mqc-generalstats-samtools-flagstat_total Samtools_mqc-generalstats-samtools-mapped_passed 584_R1_001 80.91024546263903 49.0 150.0 9.090909090909092 35721167.0 584_R2_001 79.53583537687108 49.0 150.0 9.090909090909092 35721167.0 593_R1_001 81.47831770843158 51.0 150.0 9.090909090909092 59464844.0 593_R2_001 80.92970520170462 51.0 150.0 9.090909090909092 59464844.0 594_R1_001 77.51714522451473 49.0 150.0 9.090909090909092 39294919.0 594_R2_001 76.62297981865288 49.0 150.0 9.090909090909092 39294919.0 649_R1 70.17112322905314 48.0 145.10648442182404 9.090909090909092 22814802.0 649_R2 70.01250621488968 48.0 144.7381363204467 9.090909090909092 22814802.0 658_R1 70.4635819613068 47.0 144.3305426272144 9.090909090909092 27062207.0 658_R2 70.46992985834581 48.0 143.8916663374868 9.090909090909092 27062207.0 661_R1_001 77.16419501393621 46.0 150.0 18.181818181818183 30328396.0 661_R2_001 76.39710920270204 46.0 150.0 18.181818181818183 30328396.0 662_R1_001 78.88473866175516 47.0 150.0 9.090909090909092 45110188.0 662_R2_001 77.63600153596306 48.0 150.0 9.090909090909092 45110188.0 664_R1_001 83.0341286538318 49.0 150.0 9.090909090909092 42653825.0 664_R2_001 81.96330931215203 49.0 150.0 9.090909090909092 42653825.0 665_R1_001 77.39435808199484 48.0 150.0 9.090909090909092 31885811.0 665_R2_001 76.55270355929184 48.0 150.0 9.090909090909092 31885811.0 FIRKO_S584_FIRKO_S584 65.45 23378073.0 FIRKO_S584_primary_unique 11.5391 78.6674 327 677.250724 FIRKO_S584_sorted 91.94089692508018 21494010 FIRKO_S584_statistics_for_all_accepted_reads 60297650 60297650 FIRKO_S584_statistics_for_primary_reads 52809758 52809758 FIRKO_S584_statistics_for_primary_unique_reads 46756146 46756146 FIRKO_S593_FIRKO_S593 69.02 41041860.0 FIRKO_S593_primary_unique 16.3127 75.93339999999999 344 737.274729 FIRKO_S593_sorted 93.55873734767381 38398246 FIRKO_S593_statistics_for_all_accepted_reads 97985078 97985078 FIRKO_S593_statistics_for_primary_reads 88777488 88777488 FIRKO_S593_statistics_for_primary_unique_reads 82083720 82083720 FIRKO_S594_FIRKO_S594 68.98 27105074.0 FIRKO_S594_primary_unique 8.439 80.5733 412 936.216723 FIRKO_S594_sorted 91.25548227612292 24734866 FIRKO_S594_statistics_for_all_accepted_reads 67164886 67164886 FIRKO_S594_statistics_for_primary_reads 59790758 59790758 FIRKO_S594_statistics_for_primary_unique_reads 54210148 54210148 FIRKO_S649_FIRKO_S649 88.96 20295865.0 FIRKO_S649_primary_unique 8.0095 82.8556 418 972.7172399999998 FIRKO_S649_sorted 92.94917954962747 18864840 FIRKO_S649_statistics_for_all_accepted_reads 51998904 51998904 FIRKO_S649_statistics_for_primary_reads 45472376 45472376 FIRKO_S649_statistics_for_primary_unique_reads 40591489 40591489 FIRKO_S658_FIRKO_S658 90.47 24482197.0 FIRKO_S658_primary_unique 2.9819999999999998 88.0609 457 1047.330582 FIRKO_S658_sorted 93.74679894945703 22951276 FIRKO_S658_statistics_for_all_accepted_reads 60532700 60532700 FIRKO_S658_statistics_for_primary_reads 53931329 53931329 FIRKO_S658_statistics_for_primary_unique_reads 48964138 48964138 FIRKO_S661_FIRKO_S661 64.89 19680047.0 FIRKO_S661_primary_unique 2.3983 89.1311 424 945.102996 FIRKO_S661_sorted 94.97464614794873 18691055 FIRKO_S661_statistics_for_all_accepted_reads 48939146 48939146 FIRKO_S661_statistics_for_primary_reads 43261022 43261022 FIRKO_S661_statistics_for_primary_unique_reads 39360094 39360094 FIRKO_S662_FIRKO_S662 68.69 30987143.0 FIRKO_S662_primary_unique 4.8102 85.3583 585 1392.886804 FIRKO_S662_sorted 92.7144590257966 28729562 FIRKO_S662_statistics_for_all_accepted_reads 76457254 76457254 FIRKO_S662_statistics_for_primary_reads 68329824 68329824 FIRKO_S662_statistics_for_primary_unique_reads 61974286 61974286 FIRKO_S664_FIRKO_S664 61.19 26098971.0 FIRKO_S664_primary_unique 12.4688 77.4986 310 621.75095 FIRKO_S664_sorted 92.19232053248383 24061247 FIRKO_S664_statistics_for_all_accepted_reads 67545546 67545546 FIRKO_S664_statistics_for_primary_reads 58822082 58822082 FIRKO_S664_statistics_for_primary_unique_reads 52197942 52197942 FIRKO_S665_FIRKO_S665 62.29 19862237.0 FIRKO_S665_primary_unique 8.0413 82.476 497 1180.828109 FIRKO_S665_sorted 92.77385523090878 18426963 FIRKO_S665_statistics_for_all_accepted_reads 50405300 50405300 FIRKO_S665_statistics_for_primary_reads 44203552 44203552 FIRKO_S665_statistics_for_primary_unique_reads 39724474 39724474