Sample	total_reads	paired_total	paired_aligned_none	paired_aligned_one	paired_aligned_multi	paired_aligned_discord_one	paired_aligned_mate_none	paired_aligned_mate_one	paired_aligned_mate_multi	overall_alignment_rate	paired_aligned_mate_multi_halved	paired_aligned_mate_none_halved	paired_aligned_mate_one_halved
G220_M01_CKDL230041222-1A_HHWMJDSX7_L1_R1	18987046	18987046	14379149	3684870	923027	786707	26615419	254405	315060	29.91	157530.0	13307709.5	127202.5
G220_M02_CKDL230041222-1A_HHWMJDSX7_L1_R1	19736867	19736867	13405525	5019351	1311991	1075279	23891346	330293	438853	39.48	219426.5	11945673.0	165146.5
G220_M03_CKDL230041222-1A_HHWMJDSX7_L1_R1	12528469	12528469	5024925	5920958	1582586	1206803	6752073	385964	498207	73.05	249103.5	3376036.5	192982.0
G220_M04_CKDL230041222-1A_HHWMJDSX7_L1_R1	28726611	28726611	27847127	703294	176190	115247	55386488	34369	42903	3.6	21451.5	27693244.0	17184.5
G220_M05_CKDL230041222-1A_HHWMJDSX7_L1_R1	31466481	31466481	31095531	298260	72690	57770	62036845	17499	21178	1.42	10589.0	31018422.5	8749.5
G220_M06_CKDL230041222-1A_HHWMJDSX7_L1_R1	11030342	11030342	6638790	3485252	906300	760177	11203946	242810	310470	49.21	155235.0	5601973.0	121405.0
README_Bowtie2.sh	250000	250000								95.16