Sample	total_passed	total_failed	duplicates_passed	duplicates_failed	mapped_passed	mapped_failed	mapped_passed_pct	mapped_failed_pct	paired in sequencing_passed	paired in sequencing_failed	read1_passed	read1_failed	read2_passed	read2_failed	properly paired_passed	properly paired_failed	properly paired_passed_pct	properly paired_failed_pct	with itself and mate mapped_passed	with itself and mate mapped_failed	singletons_passed	singletons_failed	singletons_passed_pct	singletons_failed_pct	with mate mapped to a different chr_passed	with mate mapped to a different chr_failed	with mate mapped to a different chr (mapQ >= 5)_passed	with mate mapped to a different chr (mapQ >= 5)_failed	flagstat_total
flagstat_G218M01	29747828	0	0	0	28044256	0	94.27	nan	29747828	0	14873914	0	14873914	0	22379626	0	75.23	nan	27105154	0	939102	0	3.16	nan	765102	0	526021	0	29747828
flagstat_G218M02	45718544	0	0	0	43314315	0	94.74	nan	45718544	0	22859272	0	22859272	0	36858706	0	80.62	nan	42494320	0	819995	0	1.79	nan	581012	0	380302	0	45718544
flagstat_G218M03	37786298	0	0	0	35967181	0	95.19	nan	37786298	0	18893149	0	18893149	0	30687130	0	81.21	nan	35345964	0	621217	0	1.64	nan	611302	0	424421	0	37786298
flagstat_G218M04	44677576	0	0	0	42646209	0	95.45	nan	44677576	0	22338788	0	22338788	0	37345838	0	83.59	nan	41786756	0	859453	0	1.92	nan	589132	0	368421	0	44677576
flagstat_G218M05	60611984	0	0	0	57508606	0	94.88	nan	60611984	0	30305992	0	30305992	0	48824784	0	80.55	nan	56492392	0	1016214	0	1.68	nan	724264	0	483629	0	60611984
flagstat_G218M06	45933952	0	0	0	43463117	0	94.62	nan	45933952	0	22966976	0	22966976	0	37434296	0	81.5	nan	42636918	0	826199	0	1.8	nan	540870	0	383242	0	45933952
flagstat_G218M07	40163342	0	0	0	37859430	0	94.26	nan	40163342	0	20081671	0	20081671	0	32386842	0	80.64	nan	37208662	0	650768	0	1.62	nan	568778	0	396136	0	40163342
flagstat_G218M08	49537940	0	0	0	46674363	0	94.22	nan	49537940	0	24768970	0	24768970	0	40359440	0	81.47	nan	45928298	0	746065	0	1.51	nan	669314	0	446800	0	49537940
flagstat_G218M13	27968922	0	0	0	25240731	0	90.25	nan	27968922	0	13984461	0	13984461	0	19211862	0	68.69	nan	23919284	0	1321447	0	4.72	nan	2286476	0	1801471	0	27968922
flagstat_G218M14	57485912	0	0	0	54430623	0	94.69	nan	57485912	0	28742956	0	28742956	0	45686236	0	79.47	nan	53327298	0	1103325	0	1.92	nan	984502	0	654655	0	57485912
flagstat_G218M15	37228278	0	0	0	35262937	0	94.72	nan	37228278	0	18614139	0	18614139	0	30304482	0	81.4	nan	34528888	0	734049	0	1.97	nan	646716	0	436722	0	37228278
flagstat_G218M16	26686504	0	0	0	22987614	0	86.14	nan	26686504	0	13343252	0	13343252	0	17609096	0	65.99	nan	21572024	0	1415590	0	5.3	nan	2823068	0	2306689	0	26686504