Sample	Bowtie 2 / HiSAT2_mqc-generalstats-bowtie_2_hisat2-overall_alignment_rate	FastQC_mqc-generalstats-fastqc-percent_duplicates	FastQC_mqc-generalstats-fastqc-percent_gc	FastQC_mqc-generalstats-fastqc-avg_sequence_length	FastQC_mqc-generalstats-fastqc-percent_fails	FastQC_mqc-generalstats-fastqc-total_sequences	MACS2_mqc-generalstats-macs2-d	MACS2_mqc-generalstats-macs2-peak_count	Picard_mqc-generalstats-picard-summed_median	Picard_mqc-generalstats-picard-summed_mean	Samtools_mqc-generalstats-samtools-flagstat_total	Samtools_mqc-generalstats-samtools-mapped_passed
G218M01_CKDL230039433-1A_HHVHMDSX7_L3_R1	94.27	18.74479951990716	46.0	150.0	0.0	14873914.0						
G218M01_CKDL230039433-1A_HHVHMDSX7_L3_R2		17.190940804231076	46.0	150.0	0.0	14873914.0						
G218M01_broad_MACS2							311.0	34593				
G218M01_narrow_MACS2							311.0	13790				
G218M01_sorted_mapped									305	311.580424		
G218M02_CKDL230039433-1A_HHVHMDSX7_L3_R1	94.74	17.013771401049624	42.0	150.0	9.090909090909092	22859272.0						
G218M02_CKDL230039433-1A_HHVHMDSX7_L3_R2		16.355711479909246	42.0	150.0	9.090909090909092	22859272.0						
G218M02_broad_MACS2							280.0	10874				
G218M02_narrow_MACS2							280.0	4843				
G218M02_sorted_mapped									269	281.040806		
G218M03_CKDL230039433-1A_HHVHMDSX7_L3_R1	95.19	18.509054464142878	41.0	150.0	9.090909090909092	18893149.0						
G218M03_CKDL230039433-1A_HHVHMDSX7_L3_R2		18.119515406724773	41.0	150.0	9.090909090909092	18893149.0						
G218M03_broad_MACS2							283.0	6547				
G218M03_narrow_MACS2							283.0	1726				
G218M03_sorted_mapped									273	283.470793		
G218M04_CKDL230039433-1A_HHVHMDSX7_L3_R1	95.45	24.688963135292525	43.0	150.0	9.090909090909092	22338788.0						
G218M04_CKDL230039433-1A_HHVHMDSX7_L3_R2		23.479544758781785	43.0	150.0	9.090909090909092	22338788.0						
G218M04_broad_MACS2							290.0	12118				
G218M04_narrow_MACS2							290.0	4144				
G218M04_sorted_mapped									281	290.958463		
G218M05_CKDL230039433-1A_HHVHMDSX7_L3_R1	94.88	16.408303595444067	43.0	150.0	9.090909090909092	30305992.0						
G218M05_CKDL230039433-1A_HHVHMDSX7_L3_R2		15.859787120637364	43.0	150.0	9.090909090909092	30305992.0						
G218M05_broad_MACS2							282.0	17818				
G218M05_narrow_MACS2							282.0	12925				
G218M05_sorted_mapped									269	282.371317		
G218M06_CKDL230039433-1A_HHVHMDSX7_L3_R1	94.62	17.01002415836645	45.0	150.0	0.0	22966976.0						
G218M06_CKDL230039433-1A_HHVHMDSX7_L3_R2		16.44892248113831	45.0	150.0	0.0	22966976.0						
G218M06_broad_MACS2							266.0	21456				
G218M06_narrow_MACS2							266.0	14473				
G218M06_sorted_mapped									251	266.797351		
G218M07_CKDL230039433-1A_HHVHMDSX7_L3_R1	94.26	18.444137877653304	41.0	150.0	9.090909090909092	20081671.0						
G218M07_CKDL230039433-1A_HHVHMDSX7_L3_R2		17.96223704992063	41.0	150.0	9.090909090909092	20081671.0						
G218M07_broad_MACS2							274.0	12056				
G218M07_narrow_MACS2							274.0	5172				
G218M07_sorted_mapped									262	274.888702		
G218M08_CKDL230039433-1A_HHVHMDSX7_L3_R1	94.22	20.15252762532637	40.0	150.0	9.090909090909092	24768970.0						
G218M08_CKDL230039433-1A_HHVHMDSX7_L3_R2		19.813715316551125	40.0	150.0	9.090909090909092	24768970.0						
G218M08_broad_MACS2							279.0	10357				
G218M08_narrow_MACS2							279.0	3368				
G218M08_sorted_mapped									268	279.38763		
G218M13_CKDL230039433-1A_HHVHMDSX7_L3_R1	90.25	36.75616738574264	42.0	150.0	9.090909090909092	13984461.0						
G218M13_CKDL230039433-1A_HHVHMDSX7_L3_R2		34.1698132159043	42.0	150.0	9.090909090909092	13984461.0						
G218M13_broad_MACS2							305.0	39282				
G218M13_narrow_MACS2							305.0	18275				
G218M13_sorted_mapped									298	305.041356		
G218M14_CKDL230039433-1A_HHVHMDSX7_L3_R1	94.69	19.592825314336352	41.0	150.0	9.090909090909092	28742956.0						
G218M14_CKDL230039433-1A_HHVHMDSX7_L3_R2		18.66674053375715	42.0	150.0	9.090909090909092	28742956.0						
G218M14_broad_MACS2							281.0	7160				
G218M14_narrow_MACS2							281.0	1807				
G218M14_sorted_mapped									269	281.987164		
G218M15_CKDL230039433-1A_HHVHMDSX7_L3_R1	94.72	20.280756423546023	42.0	150.0	9.090909090909092	18614139.0						
G218M15_CKDL230039433-1A_HHVHMDSX7_L3_R2		19.154583672720605	42.0	150.0	9.090909090909092	18614139.0						
G218M15_broad_MACS2							282.0	2175				
G218M15_narrow_MACS2							282.0	344				
G218M15_sorted_mapped									271	283.039461		
G218M16_CKDL230039433-1A_HHVHMDSX7_L3_R1	86.14	44.29525162999713	39.0	150.0	9.090909090909092	13343252.0						
G218M16_CKDL230039433-1A_HHVHMDSX7_L3_R2		41.050636552234785	39.0	150.0	9.090909090909092	13343252.0						
G218M16_broad_MACS2							265.0	25693				
G218M16_narrow_MACS2							265.0	5301				
G218M16_sorted_mapped									246	264.110459		
README_Bowtie2.sh	95.16											
flagstat_G218M01											29747828	28044256
flagstat_G218M02											45718544	43314315
flagstat_G218M03											37786298	35967181
flagstat_G218M04											44677576	42646209
flagstat_G218M05											60611984	57508606
flagstat_G218M06											45933952	43463117
flagstat_G218M07											40163342	37859430
flagstat_G218M08											49537940	46674363
flagstat_G218M13											27968922	25240731
flagstat_G218M14											57485912	54430623
flagstat_G218M15											37228278	35262937
flagstat_G218M16											26686504	22987614