Sample	total_reads	paired_total	paired_aligned_none	paired_aligned_one	paired_aligned_multi	paired_aligned_discord_one	paired_aligned_mate_none	paired_aligned_mate_one	paired_aligned_mate_multi	overall_alignment_rate	paired_aligned_mate_multi_halved	paired_aligned_mate_none_halved	paired_aligned_mate_one_halved
G218M01_CKDL230039433-1A_HHVHMDSX7_L3_R1	14873914	14873914	3684101	8781568	2408245	1852806	1703572	942573	1016445	94.27	508222.5	851786.0	471286.5
G218M02_CKDL230039433-1A_HHVHMDSX7_L3_R1	22859272	22859272	4429919	14712942	3716411	2322793	2404229	824020	986003	94.74	493001.5	1202114.5	412010.0
G218M03_CKDL230039433-1A_HHVHMDSX7_L3_R1	18893149	18893149	3549584	11830185	3513380	1876657	1819117	663937	862800	95.19	431400.0	909558.5	331968.5
G218M04_CKDL230039433-1A_HHVHMDSX7_L3_R1	22338788	22338788	3665869	12954083	5718836	1728300	2031367	805157	1038614	95.45	519307.0	1015683.5	402578.5
G218M05_CKDL230039433-1A_HHVHMDSX7_L3_R1	30305992	30305992	5893600	19991411	4420981	3219739	3103378	1032424	1211920	94.88	605960.0	1551689.0	516212.0
G218M06_CKDL230039433-1A_HHVHMDSX7_L3_R1	22966976	22966976	4249828	15115544	3601604	2219409	2470835	800391	789612	94.62	394806.0	1235417.5	400195.5
G218M07_CKDL230039433-1A_HHVHMDSX7_L3_R1	20081671	20081671	3888250	12511828	3681593	1993158	2303912	666583	819689	94.26	409844.5	1151956.0	333291.5
G218M08_CKDL230039433-1A_HHVHMDSX7_L3_R1	24768970	24768970	4589250	14989272	5190448	2252139	2863577	759473	1051172	94.22	525586.0	1431788.5	379736.5
G218M13_CKDL230039433-1A_HHVHMDSX7_L3_R1	13984461	13984461	4378530	4005245	5600686	1552457	2728191	1268016	1655939	90.25	827969.5	1364095.5	634008.0
G218M14_CKDL230039433-1A_HHVHMDSX7_L3_R1	28742956	28742956	5899838	17412505	5430613	3044824	3055289	1141820	1512919	94.69	756459.5	1527644.5	570910.0
G218M15_CKDL230039433-1A_HHVHMDSX7_L3_R1	18614139	18614139	3461898	10979305	4172936	1640989	1965341	739352	937125	94.72	468562.5	982670.5	369676.0
G218M16_CKDL230039433-1A_HHVHMDSX7_L3_R1	13343252	13343252	4538704	2221225	6583323	1166189	3698890	1346758	1699382	86.14	849691.0	1849445.0	673379.0
README_Bowtie2.sh	250000	250000								95.16